STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydgJannotation not available (346 aa)    
Predicted Functional Partners:
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Beta-lactam resistance membrane protein; Component of the cell division machinery, which is probably involved in the stabilization of the divisome under certain stress conditions
     
 0.767
yggP
Putative zinc-binding dehydrogenase yggp; To K.pneumoniae SorE
   
  
 0.741
ydjJ
Putative zn-dependent nad(p)-binding oxidoreductase; Uncharacterized zinc-type alcohol dehydrogenase-like protein YdjJ; Putative oxidoreductase
   
  
 0.739
ygcW
Putative deoxygluconate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family
   
  
 0.739
ygfF
Putative nad(p)-binding oxidoreductase with nad(p)-binding rossmann-fold domain; Uncharacterized oxidoreductase YgfF; Putative oxidoreductase
   
  
 0.737
yhiN
Uncharacterized protein YhiN; Putative enzyme; Not classified; To H.influenzae HI_0933
     
 0.732
ydbC
Putative nad(p)-binding oxidoreductase; Catalyzes the NAD(P)H-dependent reduction of pyridoxal to pyridoxine in vitro. Is not able to reduce 4-pyridoxate, and to oxidize pyridoxine or pyridoxamine . Has Kemp eliminase activity towards the non-physiological substrate 5-nitrobenzisoxazole, producing 4-nitro-2-cyanophenol; this activity is not considered to be physiologically relevant
     
 0.731
yqiB
DUF1249 domain-containing protein YqiB; Uncharacterized protein YqiB; Putative enzyme
      
 0.730
ygjR
Putative nad(p)-dependent dehydrogenase; Belongs to the Gfo/Idh/MocA family
      
 0.730
yceM
Putative oxidoreductase ycem; Belongs to the Gfo/Idh/MocA family
  
   
 0.718
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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