STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsxBElectron transport complex subunit RsxB; Part of a membrane complex involved in electron transport. Required to maintain the reduced state of SoxR; Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily (192 aa)    
Predicted Functional Partners:
rsxC
Electron transport complex subunit RsxC; Part of a membrane complex involved in electron transport. Required to maintain the reduced state of SoxR; Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily
  
 0.996
rsxA
Electron transport complex subunit RsxA; Part of a membrane complex involved in electron transport. Required to maintain the reduced state of SoxR
  
 0.994
rsxG
Electron transport complex subunit RsxG; Part of a membrane complex involved in electron transport. Required to maintain the reduced state of SoxR
  
 0.989
rsxD
Electron transport complex subunit RsxD; Part of a membrane complex involved in electron transport. Required to maintain the reduced state of SoxR
 
  
 0.985
rsxE
Electron transport complex subunit RsxE; Part of a membrane complex involved in electron transport. Required to maintain the reduced state of SoxR
 
  
 0.985
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
  
  
 0.931
pfo
Probable pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
 
   
 0.786
yfjK
Uncharacterized protein YfjK; Phage or Prophage Related
      
 0.771
gsiB
Glutathione-binding protein GsiB; Part of the ABC transporter complex GsiABCD involved in glutathione import
      
 0.751
ratB
UPF0125 protein RatB; Does not function as an antitoxin to the upstream RatA toxin
 
   
 0.743
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
Server load: low (14%) [HD]