Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cbrA | ydhT | b3690 | b1669 | Colicin m resistance protein; Belongs to the CbrA family | annotation not available | 0.729 |
| cbrA | ydhU | b3690 | b1670 | Colicin m resistance protein; Belongs to the CbrA family | Putative cytochrome b subunit of ydhyvwxut oxidoreductase complex; Putative cytochrome YdhU; Putative enzyme; Not classified | 0.700 |
| cbrA | ydhV | b3690 | b1673 | Colicin m resistance protein; Belongs to the CbrA family | annotation not available | 0.608 |
| cbrA | ydhW | b3690 | b1672 | Colicin m resistance protein; Belongs to the CbrA family | annotation not available | 0.704 |
| panF | panM | b3258 | b3459 | Pantothenate:sodium symporter; Catalyzes the sodium-dependent uptake of extracellular pantothenate | Pand autocleavage accelerator, panothenate synthesis; Controls both the activation and catalytic activity of PanD in a coenzyme A (CoA)-dependent fashion. Binding of CoA or a derivative to PanZ leads to interaction with PanD, which promotes the processing and activation of pro-PanD, and subsequent substrate-mediated inhibition of the active form of PanD Inhibition of PanD activity is probably the primary metabolic role of PanZ, allowing negative feedback regulation of pantothenate biosynthesis by CoA | 0.678 |
| panF | ydhT | b3258 | b1669 | Pantothenate:sodium symporter; Catalyzes the sodium-dependent uptake of extracellular pantothenate | annotation not available | 0.731 |
| panF | yhdT | b3258 | b3257 | Pantothenate:sodium symporter; Catalyzes the sodium-dependent uptake of extracellular pantothenate | DUF997 family putative inner membrane protein; To H.influenzae HI_0974B | 0.989 |
| panM | panF | b3459 | b3258 | Pand autocleavage accelerator, panothenate synthesis; Controls both the activation and catalytic activity of PanD in a coenzyme A (CoA)-dependent fashion. Binding of CoA or a derivative to PanZ leads to interaction with PanD, which promotes the processing and activation of pro-PanD, and subsequent substrate-mediated inhibition of the active form of PanD Inhibition of PanD activity is probably the primary metabolic role of PanZ, allowing negative feedback regulation of pantothenate biosynthesis by CoA | Pantothenate:sodium symporter; Catalyzes the sodium-dependent uptake of extracellular pantothenate | 0.678 |
| panM | ydhT | b3459 | b1669 | Pand autocleavage accelerator, panothenate synthesis; Controls both the activation and catalytic activity of PanD in a coenzyme A (CoA)-dependent fashion. Binding of CoA or a derivative to PanZ leads to interaction with PanD, which promotes the processing and activation of pro-PanD, and subsequent substrate-mediated inhibition of the active form of PanD Inhibition of PanD activity is probably the primary metabolic role of PanZ, allowing negative feedback regulation of pantothenate biosynthesis by CoA | annotation not available | 0.731 |
| panM | yhdT | b3459 | b3257 | Pand autocleavage accelerator, panothenate synthesis; Controls both the activation and catalytic activity of PanD in a coenzyme A (CoA)-dependent fashion. Binding of CoA or a derivative to PanZ leads to interaction with PanD, which promotes the processing and activation of pro-PanD, and subsequent substrate-mediated inhibition of the active form of PanD Inhibition of PanD activity is probably the primary metabolic role of PanZ, allowing negative feedback regulation of pantothenate biosynthesis by CoA | DUF997 family putative inner membrane protein; To H.influenzae HI_0974B | 0.779 |
| ttdR | ydhT | b3060 | b1669 | Lysr family transcriptional regulator, transcriptional activator for ttdabt operon; Positive regulator required for L-tartrate-dependent anaerobic growth on glycerol. Induces expression of the ttdA-ttdB-ygjE operon | annotation not available | 0.568 |
| ttdR | ydhU | b3060 | b1670 | Lysr family transcriptional regulator, transcriptional activator for ttdabt operon; Positive regulator required for L-tartrate-dependent anaerobic growth on glycerol. Induces expression of the ttdA-ttdB-ygjE operon | Putative cytochrome b subunit of ydhyvwxut oxidoreductase complex; Putative cytochrome YdhU; Putative enzyme; Not classified | 0.452 |
| ttdR | ydhW | b3060 | b1672 | Lysr family transcriptional regulator, transcriptional activator for ttdabt operon; Positive regulator required for L-tartrate-dependent anaerobic growth on glycerol. Induces expression of the ttdA-ttdB-ygjE operon | annotation not available | 0.488 |
| ydhT | cbrA | b1669 | b3690 | annotation not available | Colicin m resistance protein; Belongs to the CbrA family | 0.729 |
| ydhT | panF | b1669 | b3258 | annotation not available | Pantothenate:sodium symporter; Catalyzes the sodium-dependent uptake of extracellular pantothenate | 0.731 |
| ydhT | panM | b1669 | b3459 | annotation not available | Pand autocleavage accelerator, panothenate synthesis; Controls both the activation and catalytic activity of PanD in a coenzyme A (CoA)-dependent fashion. Binding of CoA or a derivative to PanZ leads to interaction with PanD, which promotes the processing and activation of pro-PanD, and subsequent substrate-mediated inhibition of the active form of PanD Inhibition of PanD activity is probably the primary metabolic role of PanZ, allowing negative feedback regulation of pantothenate biosynthesis by CoA | 0.731 |
| ydhT | ttdR | b1669 | b3060 | annotation not available | Lysr family transcriptional regulator, transcriptional activator for ttdabt operon; Positive regulator required for L-tartrate-dependent anaerobic growth on glycerol. Induces expression of the ttdA-ttdB-ygjE operon | 0.568 |
| ydhT | ydhU | b1669 | b1670 | annotation not available | Putative cytochrome b subunit of ydhyvwxut oxidoreductase complex; Putative cytochrome YdhU; Putative enzyme; Not classified | 0.967 |
| ydhT | ydhV | b1669 | b1673 | annotation not available | annotation not available | 0.957 |
| ydhT | ydhW | b1669 | b1672 | annotation not available | annotation not available | 0.972 |
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