STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydhVannotation not available (700 aa)    
Predicted Functional Partners:
ydhW
annotation not available
  
 0.998
ydhY
Putative 4fe-4s ferredoxin-type protein; Uncharacterized ferredoxin-like protein YdhY; Putative oxidoreductase, Fe-S subunit
   0.972
ydhT
annotation not available
    0.957
ydhU
Putative cytochrome b subunit of ydhyvwxut oxidoreductase complex; Putative cytochrome YdhU; Putative enzyme; Not classified
 
    0.927
ydhX
Putative 4fe-4s ferredoxin-type protein; Uncharacterized ferredoxin-like protein YdhX; Putative oxidoreductase, Fe-S subunit
 
   0.862
ybdR
Uncharacterized zinc-type alcohol dehydrogenase-like protein YbdR; Putative oxidoreductase
      
 0.789
ybeQ
Sel1 family TPR-like repeat protein; To E.coli YbeT
      
 0.787
yeaK
annotation not available
      
 0.756
yddA
Vitamin b12/bleomycin/antimicrobial peptide transport system atp-binding/permease protein; Inner membrane ABC transporter ATP-binding protein YddA; Putative transport; Not classified
      
 0.710
araH
L-arabinose transport system permease protein; Part of the binding-protein-dependent transport system for L- arabinose. Probably responsible for the translocation of the substrate across the membrane
      
 0.679
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.