STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yniAFructosamine kinase family protein; Ketoamine kinase that phosphorylates ketoamines on the third carbon of the sugar moiety to generate ketoamine 3-phosphate (By similarity). Its precise substrate are unknown: does not have ribulosamine and/or erythrulosamine 3-kinase activity in vitro (286 aa)    
Predicted Functional Partners:
ydiS
Electron transfer flavoprotein-quinone oxidoreductase; Probably accepts electrons from YdiQ/YdiR and reduces a quinone
   
  
 0.882
ydiZ
annotation not available
  
   0.873
yniC
Mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase; Sugar-phosphate phosphohydrolase that catalyzes the dephosphorylation of D-mannitol 1-phosphate and D-sorbitol 6-phosphate . Also catalyzes the dephosphorylation of 2- deoxyglucose 6-phosphate (2dGlu6P); this is a biologically important activity in vivo since it contributes to the elimination of this toxic compound and plays an important role in the resistance of E.coli to 2- deoxyglucose . To a lesser extent, is also able to dephosphorylate mannose 6-phosphate (Man6P), erythrose-4-phosphate, 2- deoxyribose-5-phosphate (2dRib [...]
  
  
 0.803
astA
Arginine n-succinyltransferase; Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine
   
  
 0.794
ybeL
DUF1451 domain-containing protein YbeL; Uncharacterized protein YbeL; Putative alpha helical protein
  
    0.793
cedA
Cell division activator; Activates the cell division inhibited by chromosomal DNA over-replication
      
 0.734
yeaG
Protein kinase, endogenous substrate unidentified; Belongs to the PrkA family
   
    0.697
yegP
DUF1508 domain-containing protein YegP; Belongs to the UPF0339 family. Duplicated subfamily
   
    0.684
dmlR
Lysr family transcriptional regulator, transcriptional activator for dmla; Transcriptional regulator required for the aerobic growth on D-malate as the sole carbon source. Induces the expression of dmlA in response to D-malate or L- or meso-tartrate. Negatively regulates its own expression
   
  
 0.630
ydjM
Putative inner membrane protein regulated by lexa; To B.subtilis YvsG
      
 0.620
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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