STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ynjBannotation not available (388 aa)    
Predicted Functional Partners:
ynjC
Putative thiamine transport system permease protein; Probably part of the binding-protein-dependent transport system YnjCD. Probably responsible for the translocation of the substrate across the membrane
 
     0.974
ynjD
Putative thiamine transport system atp-binding protein; Probably part of a binding-protein-dependent transport system YnjCD. Probably responsible for energy coupling to the transport system
 
     0.960
ydjX
TVP38/TMEM64 family inner membrane protein; Belongs to the TVP38/TMEM64 family
 
     0.938
ydjZ
TVP38/TMEM64 family inner membrane protein; Belongs to the TVP38/TMEM64 family
 
     0.928
ynjA
Carboxymuconolactone decarboxylase family protein; To M.tuberculosis Rv2313c
 
    0.900
ynjE
Thiosulfate sulfurtransferase YnjE; Putative thiosulfate sulfur transferase; Protein involved in sulfur metabolic process
 
    0.886
ydjY
annotation not available
       0.863
ynjF
Cdp-alcohol phosphatidyltransferase family inner membrane protein; Inner membrane protein YnjF; Putative cytochrome oxidase
 
     0.846
xthA
Exodeoxyribonuclease iii; Major apurinic-apyrimidinic endonuclease of E.coli. It removes the damaged DNA at cytosines and guanines by cleaving on the 3'-side of the AP site by a beta-elimination reaction. It exhibits 3'- 5'-exonuclease, 3'-phosphomonoesterase, 3'-repair diesterase and ribonuclease H activities
       0.530
yjdP
Uncharacterized protein YjdP; Conserved hypothetical protein; conserved in EDL933 and CFT073; on opposite strand of the now deaccessioned phnQ (b4091)
  
     0.436
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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