STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ynjDPutative thiamine transport system atp-binding protein; Probably part of a binding-protein-dependent transport system YnjCD. Probably responsible for energy coupling to the transport system (217 aa)    
Predicted Functional Partners:
ynjC
Putative thiamine transport system permease protein; Probably part of the binding-protein-dependent transport system YnjCD. Probably responsible for the translocation of the substrate across the membrane
 
     0.962
ynjB
annotation not available
 
     0.960
ydjZ
TVP38/TMEM64 family inner membrane protein; Belongs to the TVP38/TMEM64 family
 
     0.886
ydjX
TVP38/TMEM64 family inner membrane protein; Belongs to the TVP38/TMEM64 family
 
     0.862
ynjA
Carboxymuconolactone decarboxylase family protein; To M.tuberculosis Rv2313c
 
     0.859
ydjY
annotation not available
 
     0.847
ynjF
Cdp-alcohol phosphatidyltransferase family inner membrane protein; Inner membrane protein YnjF; Putative cytochrome oxidase
 
    0.807
ynjE
Thiosulfate sulfurtransferase YnjE; Putative thiosulfate sulfur transferase; Protein involved in sulfur metabolic process
 
     0.757
btuD
Vitamin b12 transport system atp-binding protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
 
     0.566
ftsY
Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components
  
     0.565
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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