STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ynjDPutative ABC transporter ATPase; Probably part of a binding-protein-dependent transport system YnjCD. Probably responsible for energy coupling to the transport system. (217 aa)    
Predicted Functional Partners:
ynjC
Putative ABC transporter permease; Probably part of the binding-protein-dependent transport system YnjCD. Probably responsible for the translocation of the substrate across the membrane.
 
 0.998
ynjB
Putative ABC transporter periplasmic binding protein.
 
 
 0.997
ydjY
Putative ferrodoxin-like lipoprotein.
     
 0.968
ydjZ
TVP38/TMEM64 family inner membrane protein; Belongs to the TVP38/TMEM64 family.
 
  
 0.966
ynjA
Carboxymuconolactone decarboxylase family protein; To M.tuberculosis Rv2313c.
 
  
 0.962
ydjX
TVP38/TMEM64 family inner membrane protein; Belongs to the TVP38/TMEM64 family.
 
   
 0.956
ynjE
Molybdopterin synthase sulfurtransferase; Putative thiosulfate sulfur transferase; Protein involved in sulfur metabolic process.
 
  
 0.875
btuD
Vitamin B12 ABC transporter ATPase; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system.
  
  
  0.837
ynjF
CDP-alcohol phosphatidyltransferase family inner membrane protein; Putative cytochrome oxidase.
 
    0.812
nikD
Nickel ABC transporter ATPase; Part of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Nickel importer (TC 3.A.1.5.3) family.
  
  
  0.728
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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