STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ynjIannotation not available (346 aa)    
Predicted Functional Partners:
ynbA
Inner membrane protein YnbA; Putative enzyme; Not classified
      
 0.872
yqhG
annotation not available
      
 0.859
ygiZ
annotation not available
      
 0.858
yecT
To R.meliloti R02472
      
 0.828
yidL
Uncharacterized HTH-type transcriptional regulator YidL; Putative ARAC-type regulatory protein; Protein involved in transcription activator activity and transcription
      
 0.826
sfsB
This protein is involved in positive regulation of the metabolism of sugars
      
 0.740
rhsB
Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell
      
 0.738
yjjQ
Putative transcription factor YjjQ; Putative regulator
      
 0.730
chiA
Bifunctional enzyme with lysozyme/chitinase activity.
      
 0.606
rhsA
Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell
      
 0.605
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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