STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydjLPutative Zn-dependent NAD(P)-binding oxidoreductase. (358 aa)    
Predicted Functional Partners:
ydjH
Putative kinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.937
ydjK
Putative MFS sugar transporter, membrane protein; Putative transport protein.
 
  
 0.931
ydjG
Methylglyoxal reductase, NADH-dependent; Catalyzes the NADH-dependent reduction of methylglyoxal (2- oxopropanal) in vitro. It is not known if this activity has physiological significance. Cannot use NADPH as a cosubstrate. Seems to play some role in intestinal colonization.
 
  
 0.898
ydjI
Putative aldolase.
 
  
 0.897
ydjJ
Putative oxidoreductase.
 
  
0.871
ydjF
Putative DEOR-type transcriptional regulator; Protein involved in transcription and regulation of transcription, DNA-dependent.
  
  
 0.838
ydjE
Putative MFS sugar transporter, membrane protein; Putative transport protein.
 
  
 0.784
yahM
Uncharacterized protein.
      
 0.731
yidX
Putative replicase EC 2.7.-.
      
 0.715
yfcI
Transposase_31 family protein; A low activity DNA endonuclease yielding 3'-hydroxyl ends (Probable). Upon expression enhances RecA-independent DNA recombination 19-fold, concomitantly reducing viability by 98% and inducing DNA damage as measured by induction of the SOS repair response. Belongs to the Rpn/YhgA-like nuclease family.
      
 0.621
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.