Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| mipA | preA | b1782 | b2147 | Scaffolding protein that interacts with murein polymerase and murein hydrolase; May serve as a scaffold protein required for the formation of a complex with MrcB/PonB and MltA, this complex could play a role in enlargement and septation of the murein sacculus | Dihydropyrimidine dehydrogenase, nadh-dependent, subunit c; Involved in pyrimidine base degradation. Catalyzes physiologically the reduction of uracil to 5,6-dihydrouracil (DHU) by using NADH as a specific cosubstrate. It also catalyzes the reverse reaction and the reduction of thymine to 5,6-dihydrothymine (DHT) | 0.561 |
| mipA | priB | b1782 | b4201 | Scaffolding protein that interacts with murein polymerase and murein hydrolase; May serve as a scaffold protein required for the formation of a complex with MrcB/PonB and MltA, this complex could play a role in enlargement and septation of the murein sacculus | Primosomal replication protein n; Binds single-stranded DNA at the primosome assembly site (PAS). During primosome assembly it facilitates the complex formation between PriA and DnaT | 0.606 |
| mipA | tig | b1782 | b0436 | Scaffolding protein that interacts with murein polymerase and murein hydrolase; May serve as a scaffold protein required for the formation of a complex with MrcB/PonB and MltA, this complex could play a role in enlargement and septation of the murein sacculus | Peptidyl-prolyl cis/trans isomerase (trigger factor); Involved in protein export. Acts as a chaperone by maintaining the newly synthesized secretory and non-secretory proteins in an open conformation. Binds to 3 regions of unfolded substrate PhoA, preferring aromatic and hydrophobic residues, keeping it stretched out and unable to form aggregates . Binds to nascent polypeptide chains via ribosomal protein L23 . Functions as a peptidyl-prolyl cis-trans isomerase in vitro, this activity is dispensible in vivo for chaperone activity | 0.578 |
| mipA | ydbH | b1782 | b1381 | Scaffolding protein that interacts with murein polymerase and murein hydrolase; May serve as a scaffold protein required for the formation of a complex with MrcB/PonB and MltA, this complex could play a role in enlargement and septation of the murein sacculus | annotation not available | 0.560 |
| mipA | yeaC | b1782 | b1777 | Scaffolding protein that interacts with murein polymerase and murein hydrolase; May serve as a scaffold protein required for the formation of a complex with MrcB/PonB and MltA, this complex could play a role in enlargement and septation of the murein sacculus | annotation not available | 0.778 |
| mipA | yeaD | b1782 | b1780 | Scaffolding protein that interacts with murein polymerase and murein hydrolase; May serve as a scaffold protein required for the formation of a complex with MrcB/PonB and MltA, this complex could play a role in enlargement and septation of the murein sacculus | D-hexose-6-phosphate epimerase-like protein; Putative glucose-6-phosphate 1-epimerase; Putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions; Belongs to the glucose-6-phosphate 1-epimerase family | 0.721 |
| mipA | yeaE | b1782 | b1781 | Scaffolding protein that interacts with murein polymerase and murein hydrolase; May serve as a scaffold protein required for the formation of a complex with MrcB/PonB and MltA, this complex could play a role in enlargement and septation of the murein sacculus | Aldo-keto reductase, methylglyoxal to acetol, nadph-dependent; Uncharacterized protein YeaE; Putative an aldehyde reductase | 0.781 |
| mipA | yeiP | b1782 | b2171 | Scaffolding protein that interacts with murein polymerase and murein hydrolase; May serve as a scaffold protein required for the formation of a complex with MrcB/PonB and MltA, this complex could play a role in enlargement and septation of the murein sacculus | Belongs to the elongation factor P family | 0.625 |
| mipA | yfeY | b1782 | b2432 | Scaffolding protein that interacts with murein polymerase and murein hydrolase; May serve as a scaffold protein required for the formation of a complex with MrcB/PonB and MltA, this complex could play a role in enlargement and septation of the murein sacculus | annotation not available | 0.590 |
| mipA | yrfF | b1782 | b3398 | Scaffolding protein that interacts with murein polymerase and murein hydrolase; May serve as a scaffold protein required for the formation of a complex with MrcB/PonB and MltA, this complex could play a role in enlargement and septation of the murein sacculus | Inner membrane protein - inhibits the rcs signaling pathway; Putative membrane protein IgaA homolog; Putative dehydrogenase | 0.569 |
| preA | mipA | b2147 | b1782 | Dihydropyrimidine dehydrogenase, nadh-dependent, subunit c; Involved in pyrimidine base degradation. Catalyzes physiologically the reduction of uracil to 5,6-dihydrouracil (DHU) by using NADH as a specific cosubstrate. It also catalyzes the reverse reaction and the reduction of thymine to 5,6-dihydrothymine (DHT) | Scaffolding protein that interacts with murein polymerase and murein hydrolase; May serve as a scaffold protein required for the formation of a complex with MrcB/PonB and MltA, this complex could play a role in enlargement and septation of the murein sacculus | 0.561 |
| preA | yeaE | b2147 | b1781 | Dihydropyrimidine dehydrogenase, nadh-dependent, subunit c; Involved in pyrimidine base degradation. Catalyzes physiologically the reduction of uracil to 5,6-dihydrouracil (DHU) by using NADH as a specific cosubstrate. It also catalyzes the reverse reaction and the reduction of thymine to 5,6-dihydrothymine (DHT) | Aldo-keto reductase, methylglyoxal to acetol, nadph-dependent; Uncharacterized protein YeaE; Putative an aldehyde reductase | 0.605 |
| preA | yeiP | b2147 | b2171 | Dihydropyrimidine dehydrogenase, nadh-dependent, subunit c; Involved in pyrimidine base degradation. Catalyzes physiologically the reduction of uracil to 5,6-dihydrouracil (DHU) by using NADH as a specific cosubstrate. It also catalyzes the reverse reaction and the reduction of thymine to 5,6-dihydrothymine (DHT) | Belongs to the elongation factor P family | 0.617 |
| priB | mipA | b4201 | b1782 | Primosomal replication protein n; Binds single-stranded DNA at the primosome assembly site (PAS). During primosome assembly it facilitates the complex formation between PriA and DnaT | Scaffolding protein that interacts with murein polymerase and murein hydrolase; May serve as a scaffold protein required for the formation of a complex with MrcB/PonB and MltA, this complex could play a role in enlargement and septation of the murein sacculus | 0.606 |
| priB | tig | b4201 | b0436 | Primosomal replication protein n; Binds single-stranded DNA at the primosome assembly site (PAS). During primosome assembly it facilitates the complex formation between PriA and DnaT | Peptidyl-prolyl cis/trans isomerase (trigger factor); Involved in protein export. Acts as a chaperone by maintaining the newly synthesized secretory and non-secretory proteins in an open conformation. Binds to 3 regions of unfolded substrate PhoA, preferring aromatic and hydrophobic residues, keeping it stretched out and unable to form aggregates . Binds to nascent polypeptide chains via ribosomal protein L23 . Functions as a peptidyl-prolyl cis-trans isomerase in vitro, this activity is dispensible in vivo for chaperone activity | 0.842 |
| tig | mipA | b0436 | b1782 | Peptidyl-prolyl cis/trans isomerase (trigger factor); Involved in protein export. Acts as a chaperone by maintaining the newly synthesized secretory and non-secretory proteins in an open conformation. Binds to 3 regions of unfolded substrate PhoA, preferring aromatic and hydrophobic residues, keeping it stretched out and unable to form aggregates . Binds to nascent polypeptide chains via ribosomal protein L23 . Functions as a peptidyl-prolyl cis-trans isomerase in vitro, this activity is dispensible in vivo for chaperone activity | Scaffolding protein that interacts with murein polymerase and murein hydrolase; May serve as a scaffold protein required for the formation of a complex with MrcB/PonB and MltA, this complex could play a role in enlargement and septation of the murein sacculus | 0.578 |
| tig | priB | b0436 | b4201 | Peptidyl-prolyl cis/trans isomerase (trigger factor); Involved in protein export. Acts as a chaperone by maintaining the newly synthesized secretory and non-secretory proteins in an open conformation. Binds to 3 regions of unfolded substrate PhoA, preferring aromatic and hydrophobic residues, keeping it stretched out and unable to form aggregates . Binds to nascent polypeptide chains via ribosomal protein L23 . Functions as a peptidyl-prolyl cis-trans isomerase in vitro, this activity is dispensible in vivo for chaperone activity | Primosomal replication protein n; Binds single-stranded DNA at the primosome assembly site (PAS). During primosome assembly it facilitates the complex formation between PriA and DnaT | 0.842 |
| tig | yeiP | b0436 | b2171 | Peptidyl-prolyl cis/trans isomerase (trigger factor); Involved in protein export. Acts as a chaperone by maintaining the newly synthesized secretory and non-secretory proteins in an open conformation. Binds to 3 regions of unfolded substrate PhoA, preferring aromatic and hydrophobic residues, keeping it stretched out and unable to form aggregates . Binds to nascent polypeptide chains via ribosomal protein L23 . Functions as a peptidyl-prolyl cis-trans isomerase in vitro, this activity is dispensible in vivo for chaperone activity | Belongs to the elongation factor P family | 0.535 |
| ydbH | mipA | b1381 | b1782 | annotation not available | Scaffolding protein that interacts with murein polymerase and murein hydrolase; May serve as a scaffold protein required for the formation of a complex with MrcB/PonB and MltA, this complex could play a role in enlargement and septation of the murein sacculus | 0.560 |
| ydbH | yfeY | b1381 | b2432 | annotation not available | annotation not available | 0.770 |
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