Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| rbsK | yeaO | b3752 | b1792 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway | Conserved protein yeao; To M.tuberculosis Rv3073c | 0.637 |
| yeaM | yeaN | b1790 | b1791 | Putative dna-binding transcriptional regulator; Negatively regulates expression of the nimT operon and its own expression. Acts by binding to the nimR-nimT intergenic region | Putative mfs transporter, inner membrane protein; Involved in efflux of 2-nitroimidazole | 0.942 |
| yeaM | yeaO | b1790 | b1792 | Putative dna-binding transcriptional regulator; Negatively regulates expression of the nimT operon and its own expression. Acts by binding to the nimR-nimT intergenic region | Conserved protein yeao; To M.tuberculosis Rv3073c | 0.512 |
| yeaN | yeaM | b1791 | b1790 | Putative mfs transporter, inner membrane protein; Involved in efflux of 2-nitroimidazole | Putative dna-binding transcriptional regulator; Negatively regulates expression of the nimT operon and its own expression. Acts by binding to the nimR-nimT intergenic region | 0.942 |
| yeaN | yeaO | b1791 | b1792 | Putative mfs transporter, inner membrane protein; Involved in efflux of 2-nitroimidazole | Conserved protein yeao; To M.tuberculosis Rv3073c | 0.671 |
| yeaO | rbsK | b1792 | b3752 | Conserved protein yeao; To M.tuberculosis Rv3073c | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway | 0.637 |
| yeaO | yeaM | b1792 | b1790 | Conserved protein yeao; To M.tuberculosis Rv3073c | Putative dna-binding transcriptional regulator; Negatively regulates expression of the nimT operon and its own expression. Acts by binding to the nimR-nimT intergenic region | 0.512 |
| yeaO | yeaN | b1792 | b1791 | Conserved protein yeao; To M.tuberculosis Rv3073c | Putative mfs transporter, inner membrane protein; Involved in efflux of 2-nitroimidazole | 0.671 |
