STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yoaCannotation not available (99 aa)    
Predicted Functional Partners:
yhhW
Has quercetin 2,3-dioxygenase activity in vitro. Its physiological role is unknown; however, may provide a mechanism that would avoid inhibition of key cellular proteins, such as DNA gyrase, by quercetin
      
 0.790
yceA
Belongs to the UPF0176 family
      
 0.784
yhaK
Does not have quercetin 2,3-dioxygenase activity.
      
 0.733
yeiE
Belongs to the LysR transcriptional regulatory family.
      
 0.730
msyB
Could participate in the normal pathway of protein export
   
    0.704
garR
Catalyzes the reduction of tatronate semialdehyde to D- glycerate
      
 0.641
yodD
annotation not available
   
  
 0.627
ygiQ
annotation not available
      
 0.619
yqjF
annotation not available
      
 0.605
yafC
Belongs to the LysR transcriptional regulatory family.
      
 0.604
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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