STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yobFannotation not available (47 aa)    
Predicted Functional Partners:
cspC
Stress protein, member of the cspa family; Cold shock protein; Protein involved in transcription activator activity, transcription and response to temperature stimulus
  
  
 0.985
yqcG
annotation not available
      
 0.820
yqgB
Acid stress response protein yqgb; Belongs to the YqgB family
      
 0.790
acrZ
Acrab-tolc efflux pump accessory protein, membrane-associated; AcrA-AcrB-AcrZ-TolC is a drug efflux protein complex with a broad substrate specificity. This protein binds to AcrB and is required for efflux of some but not all substrates, suggesting it may influence the specificity of drug export
      
 0.731
yceO
annotation not available
      
 0.731
ykgR
annotation not available
      
 0.705
yjeJ
annotation not available
      
 0.678
ygcG
annotation not available
      
 0.641
cydX
Cytochrome d (bd-i) ubiquinol oxidase subunit x; Required for correct functioning of cytochrome bd-I oxidase. This protein and AppX may have some functional overlap
      
 0.607
azuC
annotation not available
      
 0.606
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.