STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yodDannotation not available (75 aa)    
Predicted Functional Partners:
yebV
annotation not available
  
   0.937
yedP
annotation not available
  
    0.889
yiaG
HTH_CROC1 family putative transcriptional regulator; Uncharacterized HTH-type transcriptional regulator YiaG; Protein involved in regulation of transcription, DNA-dependent
  
    0.888
yhhA
annotation not available
  
    0.855
ycgB
Spovr family stationary phase protein; To B.subtilis SpoVR
   
  
 0.848
yegP
DUF1508 domain-containing protein YegP; Belongs to the UPF0339 family. Duplicated subfamily
   
    0.842
ychH
annotation not available
   
  
 0.820
yhfG
annotation not available
  
    0.819
dsrB
annotation not available
 
  
 0.793
uspB
Putative universal stress (ethanol tolerance) protein b; Belongs to the universal stress protein B family
   
  
 0.787
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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