Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
mprA | yedA | b2684 | b1959 | Transcriptional repressor of microcin B17 synthesis and multidrug efflux; Negative regulator of the multidrug operon emrAB. | Amino acid exporter for phenylalanine, threonine; Putative transmembrane subunit. | 0.440 |
topB | yedA | b1763 | b1959 | DNA topoisomerase III; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA su [...] | Amino acid exporter for phenylalanine, threonine; Putative transmembrane subunit. | 0.581 |
yddG | yedA | b1473 | b1959 | Aromatic amino acid exporter YddG; Probable efflux pump. Overexpression confers resistance to phenylalanine and increases export of phenylalanine, tyrosine and tryptophan; Belongs to the drug/metabolite transporter (DMT) superfamily. Aromatic amino acid/paraquat exporter (ArAA/P-E) (TC 2.A.7.17) family. | Amino acid exporter for phenylalanine, threonine; Putative transmembrane subunit. | 0.525 |
ydgA | yedA | b1614 | b1959 | DUF945 family protein. | Amino acid exporter for phenylalanine, threonine; Putative transmembrane subunit. | 0.451 |
yedA | mprA | b1959 | b2684 | Amino acid exporter for phenylalanine, threonine; Putative transmembrane subunit. | Transcriptional repressor of microcin B17 synthesis and multidrug efflux; Negative regulator of the multidrug operon emrAB. | 0.440 |
yedA | topB | b1959 | b1763 | Amino acid exporter for phenylalanine, threonine; Putative transmembrane subunit. | DNA topoisomerase III; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA su [...] | 0.581 |
yedA | yddG | b1959 | b1473 | Amino acid exporter for phenylalanine, threonine; Putative transmembrane subunit. | Aromatic amino acid exporter YddG; Probable efflux pump. Overexpression confers resistance to phenylalanine and increases export of phenylalanine, tyrosine and tryptophan; Belongs to the drug/metabolite transporter (DMT) superfamily. Aromatic amino acid/paraquat exporter (ArAA/P-E) (TC 2.A.7.17) family. | 0.525 |
yedA | ydgA | b1959 | b1614 | Amino acid exporter for phenylalanine, threonine; Putative transmembrane subunit. | DUF945 family protein. | 0.451 |
yedA | yedI | b1959 | b1958 | Amino acid exporter for phenylalanine, threonine; Putative transmembrane subunit. | DUF808 family inner membrane protein. | 0.514 |
yedA | yegI | b1959 | b2070 | Amino acid exporter for phenylalanine, threonine; Putative transmembrane subunit. | Protein kinase-related putative non-specific DNA-binding protein; Probable serine/threonine kinase. | 0.480 |
yedA | yijF | b1959 | b3944 | Amino acid exporter for phenylalanine, threonine; Putative transmembrane subunit. | DUF1287 family protein. | 0.502 |
yedI | yedA | b1958 | b1959 | DUF808 family inner membrane protein. | Amino acid exporter for phenylalanine, threonine; Putative transmembrane subunit. | 0.514 |
yegI | yedA | b2070 | b1959 | Protein kinase-related putative non-specific DNA-binding protein; Probable serine/threonine kinase. | Amino acid exporter for phenylalanine, threonine; Putative transmembrane subunit. | 0.480 |
yegI | yijF | b2070 | b3944 | Protein kinase-related putative non-specific DNA-binding protein; Probable serine/threonine kinase. | DUF1287 family protein. | 0.528 |
yijF | yedA | b3944 | b1959 | DUF1287 family protein. | Amino acid exporter for phenylalanine, threonine; Putative transmembrane subunit. | 0.502 |
yijF | yegI | b3944 | b2070 | DUF1287 family protein. | Protein kinase-related putative non-specific DNA-binding protein; Probable serine/threonine kinase. | 0.528 |