node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cbeA | flu | b2004 | b2000 | CP4-44 prophage; Antitoxin component of a type IV toxin-antitoxin (TA) system. Antitoxin that counteracts the effect of its cognate toxin CbtA (YeeV). It does not bind to the toxin but instead binds to MreB and FtsZ (the toxin targets), enhancing their polymerization by forming higher-order bundles; it is probably retained in the MreB and FtsZ filament bundles. The mechanism has been proposed to require intergenic DNA, in cis, between the cbeA (yeeU) and cbta (yeeV) genes. The intergenic region was not found to be necessary in another study. Also counteracts the morphological defects c [...] | Novel sRNA, CP4-44; Controls colony form variation and autoaggregation. May function as an adhesin. | 0.425 |
cbeA | yeeR | b2004 | b2001 | CP4-44 prophage; Antitoxin component of a type IV toxin-antitoxin (TA) system. Antitoxin that counteracts the effect of its cognate toxin CbtA (YeeV). It does not bind to the toxin but instead binds to MreB and FtsZ (the toxin targets), enhancing their polymerization by forming higher-order bundles; it is probably retained in the MreB and FtsZ filament bundles. The mechanism has been proposed to require intergenic DNA, in cis, between the cbeA (yeeU) and cbta (yeeV) genes. The intergenic region was not found to be necessary in another study. Also counteracts the morphological defects c [...] | CP4-44 prophage; putative membrane protein. | 0.644 |
cbeA | yeeS | b2004 | b2002 | CP4-44 prophage; Antitoxin component of a type IV toxin-antitoxin (TA) system. Antitoxin that counteracts the effect of its cognate toxin CbtA (YeeV). It does not bind to the toxin but instead binds to MreB and FtsZ (the toxin targets), enhancing their polymerization by forming higher-order bundles; it is probably retained in the MreB and FtsZ filament bundles. The mechanism has been proposed to require intergenic DNA, in cis, between the cbeA (yeeU) and cbta (yeeV) genes. The intergenic region was not found to be necessary in another study. Also counteracts the morphological defects c [...] | CP4-44 prophage; Putative DNA repair protein, RADC family; Belongs to the UPF0758 family. | 0.652 |
cbeA | yeeT | b2004 | b2003 | CP4-44 prophage; Antitoxin component of a type IV toxin-antitoxin (TA) system. Antitoxin that counteracts the effect of its cognate toxin CbtA (YeeV). It does not bind to the toxin but instead binds to MreB and FtsZ (the toxin targets), enhancing their polymerization by forming higher-order bundles; it is probably retained in the MreB and FtsZ filament bundles. The mechanism has been proposed to require intergenic DNA, in cis, between the cbeA (yeeU) and cbta (yeeV) genes. The intergenic region was not found to be necessary in another study. Also counteracts the morphological defects c [...] | CP4-44 prophage; uncharacterized protein; Belongs to the YeeT/YkfH/YpjJ family. | 0.761 |
flu | cbeA | b2000 | b2004 | Novel sRNA, CP4-44; Controls colony form variation and autoaggregation. May function as an adhesin. | CP4-44 prophage; Antitoxin component of a type IV toxin-antitoxin (TA) system. Antitoxin that counteracts the effect of its cognate toxin CbtA (YeeV). It does not bind to the toxin but instead binds to MreB and FtsZ (the toxin targets), enhancing their polymerization by forming higher-order bundles; it is probably retained in the MreB and FtsZ filament bundles. The mechanism has been proposed to require intergenic DNA, in cis, between the cbeA (yeeU) and cbta (yeeV) genes. The intergenic region was not found to be necessary in another study. Also counteracts the morphological defects c [...] | 0.425 |
flu | yeeR | b2000 | b2001 | Novel sRNA, CP4-44; Controls colony form variation and autoaggregation. May function as an adhesin. | CP4-44 prophage; putative membrane protein. | 0.979 |
flu | yeeS | b2000 | b2002 | Novel sRNA, CP4-44; Controls colony form variation and autoaggregation. May function as an adhesin. | CP4-44 prophage; Putative DNA repair protein, RADC family; Belongs to the UPF0758 family. | 0.587 |
gntX | ycaI | b3413 | b0913 | DNA catabolic protein; Required for the use of extracellular DNA as a nutrient. Has been suggested to be involved in gluconate metabolism ; Belongs to the ComF/GntX family. | ComEC family inner membrane protein. | 0.806 |
gntX | yeeS | b3413 | b2002 | DNA catabolic protein; Required for the use of extracellular DNA as a nutrient. Has been suggested to be involved in gluconate metabolism ; Belongs to the ComF/GntX family. | CP4-44 prophage; Putative DNA repair protein, RADC family; Belongs to the UPF0758 family. | 0.610 |
mreC | yeeS | b3250 | b2002 | Cell wall structural complex MreBCD transmembrane component MreC; Involved in formation and maintenance of cell shape. Responsible for formation of rod shape. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreC family. | CP4-44 prophage; Putative DNA repair protein, RADC family; Belongs to the UPF0758 family. | 0.566 |
mutS | yeeS | b2733 | b2002 | Methyl-directed mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | CP4-44 prophage; Putative DNA repair protein, RADC family; Belongs to the UPF0758 family. | 0.732 |
yafZ | yeeR | b0252 | b2001 | UPF0380 protein YafZ; CP4-6 prophage; putative DNA-binding transcriptional regulator;Phage or Prophage Related; Belongs to the UPF0380 family. | CP4-44 prophage; putative membrane protein. | 0.546 |
yafZ | yeeS | b0252 | b2002 | UPF0380 protein YafZ; CP4-6 prophage; putative DNA-binding transcriptional regulator;Phage or Prophage Related; Belongs to the UPF0380 family. | CP4-44 prophage; Putative DNA repair protein, RADC family; Belongs to the UPF0758 family. | 0.538 |
yafZ | yeeT | b0252 | b2003 | UPF0380 protein YafZ; CP4-6 prophage; putative DNA-binding transcriptional regulator;Phage or Prophage Related; Belongs to the UPF0380 family. | CP4-44 prophage; uncharacterized protein; Belongs to the YeeT/YkfH/YpjJ family. | 0.564 |
ycaI | gntX | b0913 | b3413 | ComEC family inner membrane protein. | DNA catabolic protein; Required for the use of extracellular DNA as a nutrient. Has been suggested to be involved in gluconate metabolism ; Belongs to the ComF/GntX family. | 0.806 |
ycaI | yeeS | b0913 | b2002 | ComEC family inner membrane protein. | CP4-44 prophage; Putative DNA repair protein, RADC family; Belongs to the UPF0758 family. | 0.534 |
yeeR | cbeA | b2001 | b2004 | CP4-44 prophage; putative membrane protein. | CP4-44 prophage; Antitoxin component of a type IV toxin-antitoxin (TA) system. Antitoxin that counteracts the effect of its cognate toxin CbtA (YeeV). It does not bind to the toxin but instead binds to MreB and FtsZ (the toxin targets), enhancing their polymerization by forming higher-order bundles; it is probably retained in the MreB and FtsZ filament bundles. The mechanism has been proposed to require intergenic DNA, in cis, between the cbeA (yeeU) and cbta (yeeV) genes. The intergenic region was not found to be necessary in another study. Also counteracts the morphological defects c [...] | 0.644 |
yeeR | flu | b2001 | b2000 | CP4-44 prophage; putative membrane protein. | Novel sRNA, CP4-44; Controls colony form variation and autoaggregation. May function as an adhesin. | 0.979 |
yeeR | yafZ | b2001 | b0252 | CP4-44 prophage; putative membrane protein. | UPF0380 protein YafZ; CP4-6 prophage; putative DNA-binding transcriptional regulator;Phage or Prophage Related; Belongs to the UPF0380 family. | 0.546 |
yeeR | yeeS | b2001 | b2002 | CP4-44 prophage; putative membrane protein. | CP4-44 prophage; Putative DNA repair protein, RADC family; Belongs to the UPF0758 family. | 0.957 |