STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yegSPhosphatidylglycerol kinase, metal-dependent; In vitro phosphorylates phosphatidylglycerol but not diacylglycerol; the in vivo substrate is unknown (299 aa)    
Predicted Functional Partners:
ogrK
Orphan ogr protein, positive regulator of p2 growth; Cryptic version of the phage P2 OGR protein which acts as an activator of P2 late transcription
      
 0.865
groL
Cpn60 chaperonin GroEL, large subunit of GroESL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
  
 
 0.832
ycfJ
annotation not available
  
   
 0.796
yfdC
Formate-nitrite transporter family protein; Inner membrane protein YfdC; Putative transport protein
 
  
 0.742
yegR
Uncharacterized protein YegR; Pseudogene, gpD phage P2-like protein D
      
 0.730
yegQ
Putative peptidase yegq; Belongs to the peptidase U32 family
     
 0.669
mgsA
Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate
    
 0.619
ymgD
Uncharacterized protein YmgD; Pseudogene; putative ATP-binding component of a transport system
      
 0.610
ycfT
annotation not available
      
 0.607
ymgG
annotation not available
      
 0.590
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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