STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yehWGlycine betaine uptake system permease protein YehW; Part of an ABC transporter complex involved in low- affinity glycine betaine uptake. Probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily (243 aa)    
Predicted Functional Partners:
osmF
Glycine betaine-binding protein YehZ; Part of an ABC transporter complex involved in low- affinity glycine betaine uptake. Binds glycine betaine with low affinity; Belongs to the OsmX family
 
 0.999
yehX
Glycine betaine uptake system ATP-binding protein YehX; Part of an ABC transporter complex involved in low- affinity glycine betaine uptake. Probably responsible for energy coupling to the transport system
 0.998
yehY
Glycine betaine uptake system permease protein YehY; Part of an ABC transporter complex involved in low- affinity glycine betaine uptake. Probably responsible for the translocation of the substrate across the membrane
 
 
 
0.992
proV
Glycine betaine/proline betaine transport system ATP-binding protein ProV; Part of the ProU ABC transporter complex involved in glycine betaine and proline betaine uptake. Probably responsible for energy coupling to the transport system (Probable)
 
   
 0.565
tauC
Taurine transport system permease protein TauC; Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane
  
   
 0.488
bglX
Periplasmic beta-glucosidase; Protein involved in carbohydrate catabolic process; Belongs to the glycosyl hydrolase 3 family
       0.462
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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