STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yfbLPutative aminopeptidase. (323 aa)    
Predicted Functional Partners:
yfbM
DUF1877 family protein.
  
  
 0.870
yfbK
Von Willebrand factor domain putative lipoprotein; To Synechocystis PCC 6803 sll0103.
  
  
 0.811
yfbO
Uncharacterized protein.
   
 0.811
yfbP
TPR-like repeats-containing protein.
   
 0.802
yfbN
Uncharacterized protein.
   
  
 0.696
ydaV
Rac prophage; Putative DNA replication factor.
      
 0.621
yeeS
CP4-44 prophage; Putative DNA repair protein, RADC family; Belongs to the UPF0758 family.
      
 0.600
menE
O-succinylbenzoate-CoA ligase; Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA); Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily.
      
 0.529
yfjY
CP4-57 prophage; Putative DNA repair protein; Belongs to the UPF0758 family.
      
 0.529
elaA
GNAT family putative N-acetyltransferase; Belongs to the UPF0039 (ElaA) family.
      
 0.506
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.