STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yfbMannotation not available (167 aa)    
Predicted Functional Partners:
yfbL
Putative m28a family peptidase; Uncharacterized protein YfbL; Putative aminopeptidase
 
   
 0.919
yfbO
annotation not available
   
  
 0.880
yfbN
annotation not available
      
 0.877
yfbK
Von willebrand factor domain putative lipoprotein; To Synechocystis PCC 6803 sll0103
 
  
 0.862
yjhI
Uncharacterized HTH-type transcriptional regulator YjhI; Putative regulator; Protein involved in transcription repressor activity and transcription
      
 0.830
menE
O-succinylbenzoic acid---coa ligase; Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA)
      
 0.828
yfbP
annotation not available
      
 0.820
ydhQ
Autotransporter adhesin-related protein; Uncharacterized protein YdhQ; Possible enzyme
  
     0.781
yfaL
Putative autotransporter adhesin yfal; Probably an autotransporter
  
     0.758
mdtO
Membrane translocase (mdr) of mdtnop efflux pump, pet family; Could be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride
  
     0.758
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.