STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsdXA D-serine-specific transporter, may function as a H(+) symporter (445 aa)    
Predicted Functional Partners:
dsdA
D-serine ammonia-lyase; D-serine dehydratase (deaminase); Protein involved in cellular amino acid catabolic process
 
  
 0.988
yhaO
Putative d/l-serine transporter; Plays a role in L-cysteine detoxification . May transport both D- and L-serine (By similarity)
  
   
 0.806
cycA
Serine/alanine/glycine/cycloserine:h(+)symporter; Permease that is involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine
      
 0.788
insK
IS150 conserved protein InsB; Involved in the transposition of the insertion sequence IS150
      
 0.736
yhaJ
Lysr family putative transcriptional regulator; Positive regulator, may be partially responsible for expression of neighboring gene dlsT (yhaO) (By similarity)
      
 0.731
yhhX
Putative oxidoreductase yhhx; Belongs to the Gfo/Idh/MocA family. Biliverdin reductase subfamily
      
 0.691
yccE
annotation not available
      
 0.679
sdaB
L-serine dehydratase 2; Deaminates also threonine, particularly when it is present in high concentration
      
 0.610
yejM
Essential inner membrane duf3413 domain-containing protein; Inner membrane protein YejM; Putative sulfatase
      
 0.603
dsdC
Lysr family transcriptional regulator, d-serine deaminase activator; Regulates the expression of the dsdX-dsdA operon
 
    0.597
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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