STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yfeKUncharacterized protein. (124 aa)    
Predicted Functional Partners:
yfeS
WGR domain protein.
  
  
 0.931
ygiM
SH3 domain protein.
   
  
 0.888
yhgE
DUF4153 family putative inner membrane protein; Putative transport.
  
     0.762
ydhK
Putative efflux protein (PET) component of YdhJK efflux pump.
      
 0.734
yebB
DUF830 family protein; To E.coli YiiX.
  
     0.679
ylbF
Putative anaerobic allantoin catabolic oxamate carbamoyltransferase; Putative carboxylase.
  
     0.641
yaiW
Microcin Bac7 uptake protein; outer membrane surface-exposed lipoprotein.
   
  
 0.630
djlB
Putative HscC co-chaperone, uncharacterized J domain-containing protein; Putative enzyme of polynucleotide modification; Protein involved in protein folding.
  
     0.591
yfeY
RpoE-regulated lipoprotein.
   
    0.574
yjfJ
PspA/IM30 family protein; Putative alpha helical protein; Belongs to the PspA/IM30 family.
  
     0.564
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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