STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yfeSannotation not available (244 aa)    
Predicted Functional Partners:
yfeK
annotation not available
 
  
 0.942
ydhK
annotation not available
      
 0.788
yaiW
annotation not available
      
 0.734
ydcU
Putative spermidine/putrescine transport system permease protein; Probably part of the ABC transporter complex YdcSTUV. Probably responsible for the translocation of the substrate across the membrane
      
 0.734
yidR
annotation not available
      
 0.731
stfR
Rac prophage; putative membrane protein; Prophage side tail fiber protein homolog StfR; Phage or Prophage Related; Belongs to the tail fiber family
  
     0.614
yidQ
DUF1375 domain-containing putative lipoprotein YidQ; To E.coli YceK
      
 0.608
codB
Cytosine transporter; Required for cytosine transport into the cell
      
 0.561
yehI
DUF4132 domain-containing protein YehI; To E.coli molybdate metabolism regulator (MolR)
  
     0.547
yibA
annotation not available
  
     0.544
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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