Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| alpA | yfjH | b2624 | b2623 | CP4-57 prophage; DNA-binding transcriptional activator AlpA; Positive regulator of the expression of the slpA gene . When overexpressed, leads to suppression of the capsule overproduction and UV sensitivity phenotypes of cells mutant for the Lon ATP-dependent protease . Part of the cryptic P4-like prophage CP4-57 . Overexpression of AlpA leads to excision of the CP4-57 prophage by IntA. This inactivates ssrA (the gene upstream of the prophage) that encodes tmRNA which is required to rescue stalled ribosomes in a process known as trans- translation | CP4-57 prophage; protein YfjH; Uncharacterized protein YfjH; Putative histone | 0.618 |
| alpA | yfjI | b2624 | b2625 | CP4-57 prophage; DNA-binding transcriptional activator AlpA; Positive regulator of the expression of the slpA gene . When overexpressed, leads to suppression of the capsule overproduction and UV sensitivity phenotypes of cells mutant for the Lon ATP-dependent protease . Part of the cryptic P4-like prophage CP4-57 . Overexpression of AlpA leads to excision of the CP4-57 prophage by IntA. This inactivates ssrA (the gene upstream of the prophage) that encodes tmRNA which is required to rescue stalled ribosomes in a process known as trans- translation | CP4-57 prophage; protein YfjI; Uncharacterized protein YfjI; Phage or Prophage Related | 0.831 |
| yfjH | alpA | b2623 | b2624 | CP4-57 prophage; protein YfjH; Uncharacterized protein YfjH; Putative histone | CP4-57 prophage; DNA-binding transcriptional activator AlpA; Positive regulator of the expression of the slpA gene . When overexpressed, leads to suppression of the capsule overproduction and UV sensitivity phenotypes of cells mutant for the Lon ATP-dependent protease . Part of the cryptic P4-like prophage CP4-57 . Overexpression of AlpA leads to excision of the CP4-57 prophage by IntA. This inactivates ssrA (the gene upstream of the prophage) that encodes tmRNA which is required to rescue stalled ribosomes in a process known as trans- translation | 0.618 |
| yfjH | yfjI | b2623 | b2625 | CP4-57 prophage; protein YfjH; Uncharacterized protein YfjH; Putative histone | CP4-57 prophage; protein YfjI; Uncharacterized protein YfjI; Phage or Prophage Related | 0.459 |
| yfjI | alpA | b2625 | b2624 | CP4-57 prophage; protein YfjI; Uncharacterized protein YfjI; Phage or Prophage Related | CP4-57 prophage; DNA-binding transcriptional activator AlpA; Positive regulator of the expression of the slpA gene . When overexpressed, leads to suppression of the capsule overproduction and UV sensitivity phenotypes of cells mutant for the Lon ATP-dependent protease . Part of the cryptic P4-like prophage CP4-57 . Overexpression of AlpA leads to excision of the CP4-57 prophage by IntA. This inactivates ssrA (the gene upstream of the prophage) that encodes tmRNA which is required to rescue stalled ribosomes in a process known as trans- translation | 0.831 |
| yfjI | yfjH | b2625 | b2623 | CP4-57 prophage; protein YfjI; Uncharacterized protein YfjI; Phage or Prophage Related | CP4-57 prophage; protein YfjH; Uncharacterized protein YfjH; Putative histone | 0.459 |
