node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
alpA | yfjI | b2624 | b2625 | CP4-57 prophage; Positive regulator of the expression of the slpA gene. When overexpressed, leads to suppression of the capsule overproduction and UV sensitivity phenotypes of cells mutant for the Lon ATP-dependent protease. Part of the cryptic P4-like prophage CP4-57. Overexpression of AlpA leads to excision of the CP4-57 prophage by IntA. This inactivates ssrA (the gene upstream of the prophage) that encodes tmRNA which is required to rescue stalled ribosomes in a process known as trans- translation. | CP4-57 prophage; uncharacterized protein. | 0.689 |
alpA | yfjJ | b2624 | b2626 | CP4-57 prophage; Positive regulator of the expression of the slpA gene. When overexpressed, leads to suppression of the capsule overproduction and UV sensitivity phenotypes of cells mutant for the Lon ATP-dependent protease. Part of the cryptic P4-like prophage CP4-57. Overexpression of AlpA leads to excision of the CP4-57 prophage by IntA. This inactivates ssrA (the gene upstream of the prophage) that encodes tmRNA which is required to rescue stalled ribosomes in a process known as trans- translation. | CP4-57 prophage; uncharacterized protein; To E.coli YagK. | 0.567 |
bglH | yfjI | b3720 | b2625 | Carbohydrate-specific outer membrane porin, cryptic; Part of a cryptic operon that is poorly expressed in vivo. May be an ancestral sugar porin with a broad carbohydrate specificity; it binds aromatic beta-D-glucosides such as arbutin and salicin, but with low affinity compared to the binding of maltooligosaccharides to the LamB porin. | CP4-57 prophage; uncharacterized protein. | 0.561 |
dnaG | yfjI | b3066 | b2625 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | CP4-57 prophage; uncharacterized protein. | 0.633 |
stfP | yfjI | b1154 | b2625 | E14 prophage; uncharacterized protein; To E.coli YfdL and M.jannaschii MJ0347. | CP4-57 prophage; uncharacterized protein. | 0.532 |
yafZ | yfjI | b0252 | b2625 | UPF0380 protein YafZ; CP4-6 prophage; putative DNA-binding transcriptional regulator;Phage or Prophage Related; Belongs to the UPF0380 family. | CP4-57 prophage; uncharacterized protein. | 0.908 |
yafZ | ykfF | b0252 | b0249 | UPF0380 protein YafZ; CP4-6 prophage; putative DNA-binding transcriptional regulator;Phage or Prophage Related; Belongs to the UPF0380 family. | CP4-6 prophage; uncharacterized protein; Belongs to the UPF0401 family. | 0.935 |
ybbP | yfjI | b0496 | b2625 | Putative ABC transporter permease; Putative oxidoreductase. | CP4-57 prophage; uncharacterized protein. | 0.530 |
ydbD | yfjI | b1407 | b2625 | PF10971 family putative periplasmic methylglyoxal resistance protein; To E.coli YkiA. | CP4-57 prophage; uncharacterized protein. | 0.529 |
ydbD | ynbB | b1407 | b1409 | PF10971 family putative periplasmic methylglyoxal resistance protein; To E.coli YkiA. | Putative CDP-diglyceride synthase; Putative phosphatidate cytidiltransferase; Protein involved in nucleobase, nucleoside and nucleotide interconversion. | 0.921 |
yfjI | alpA | b2625 | b2624 | CP4-57 prophage; uncharacterized protein. | CP4-57 prophage; Positive regulator of the expression of the slpA gene. When overexpressed, leads to suppression of the capsule overproduction and UV sensitivity phenotypes of cells mutant for the Lon ATP-dependent protease. Part of the cryptic P4-like prophage CP4-57. Overexpression of AlpA leads to excision of the CP4-57 prophage by IntA. This inactivates ssrA (the gene upstream of the prophage) that encodes tmRNA which is required to rescue stalled ribosomes in a process known as trans- translation. | 0.689 |
yfjI | bglH | b2625 | b3720 | CP4-57 prophage; uncharacterized protein. | Carbohydrate-specific outer membrane porin, cryptic; Part of a cryptic operon that is poorly expressed in vivo. May be an ancestral sugar porin with a broad carbohydrate specificity; it binds aromatic beta-D-glucosides such as arbutin and salicin, but with low affinity compared to the binding of maltooligosaccharides to the LamB porin. | 0.561 |
yfjI | dnaG | b2625 | b3066 | CP4-57 prophage; uncharacterized protein. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.633 |
yfjI | stfP | b2625 | b1154 | CP4-57 prophage; uncharacterized protein. | E14 prophage; uncharacterized protein; To E.coli YfdL and M.jannaschii MJ0347. | 0.532 |
yfjI | yafZ | b2625 | b0252 | CP4-57 prophage; uncharacterized protein. | UPF0380 protein YafZ; CP4-6 prophage; putative DNA-binding transcriptional regulator;Phage or Prophage Related; Belongs to the UPF0380 family. | 0.908 |
yfjI | ybbP | b2625 | b0496 | CP4-57 prophage; uncharacterized protein. | Putative ABC transporter permease; Putative oxidoreductase. | 0.530 |
yfjI | ydbD | b2625 | b1407 | CP4-57 prophage; uncharacterized protein. | PF10971 family putative periplasmic methylglyoxal resistance protein; To E.coli YkiA. | 0.529 |
yfjI | yfjJ | b2625 | b2626 | CP4-57 prophage; uncharacterized protein. | CP4-57 prophage; uncharacterized protein; To E.coli YagK. | 0.967 |
yfjI | ykfF | b2625 | b0249 | CP4-57 prophage; uncharacterized protein. | CP4-6 prophage; uncharacterized protein; Belongs to the UPF0401 family. | 0.621 |
yfjI | ynbB | b2625 | b1409 | CP4-57 prophage; uncharacterized protein. | Putative CDP-diglyceride synthase; Putative phosphatidate cytidiltransferase; Protein involved in nucleobase, nucleoside and nucleotide interconversion. | 0.631 |