Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
yfjQ | yfjR | b2633 | b2634 | CP4-57 prophage; uncharacterized protein; Belongs to the UPF0380 family. | CP4-57 prophage; putative DNA-binding transcriptional regulator. | 0.517 |
yfjQ | yfjS | b2633 | b2636 | CP4-57 prophage; uncharacterized protein; Belongs to the UPF0380 family. | CP4-57 prophage; Does not induce degP when overexpressed unless it is mutated to resemble YafY. | 0.444 |
yfjQ | yfjT | b2633 | b2637 | CP4-57 prophage; uncharacterized protein; Belongs to the UPF0380 family. | CP4-57 prophage; putative periplasmic protein; To E.coli YkfB. | 0.406 |
yfjR | yfjQ | b2634 | b2633 | CP4-57 prophage; putative DNA-binding transcriptional regulator. | CP4-57 prophage; uncharacterized protein; Belongs to the UPF0380 family. | 0.517 |
yfjR | yfjS | b2634 | b2636 | CP4-57 prophage; putative DNA-binding transcriptional regulator. | CP4-57 prophage; Does not induce degP when overexpressed unless it is mutated to resemble YafY. | 0.750 |
yfjR | yfjT | b2634 | b2637 | CP4-57 prophage; putative DNA-binding transcriptional regulator. | CP4-57 prophage; putative periplasmic protein; To E.coli YkfB. | 0.611 |
yfjR | ypjK | b2634 | b2635 | CP4-57 prophage; putative DNA-binding transcriptional regulator. | CP4-57 prophage; putative inner membrane protein; To E.coli YkfL. | 0.639 |
yfjS | yfjQ | b2636 | b2633 | CP4-57 prophage; Does not induce degP when overexpressed unless it is mutated to resemble YafY. | CP4-57 prophage; uncharacterized protein; Belongs to the UPF0380 family. | 0.444 |
yfjS | yfjR | b2636 | b2634 | CP4-57 prophage; Does not induce degP when overexpressed unless it is mutated to resemble YafY. | CP4-57 prophage; putative DNA-binding transcriptional regulator. | 0.750 |
yfjS | yfjT | b2636 | b2637 | CP4-57 prophage; Does not induce degP when overexpressed unless it is mutated to resemble YafY. | CP4-57 prophage; putative periplasmic protein; To E.coli YkfB. | 0.771 |
yfjS | ypjK | b2636 | b2635 | CP4-57 prophage; Does not induce degP when overexpressed unless it is mutated to resemble YafY. | CP4-57 prophage; putative inner membrane protein; To E.coli YkfL. | 0.779 |
yfjT | yfjQ | b2637 | b2633 | CP4-57 prophage; putative periplasmic protein; To E.coli YkfB. | CP4-57 prophage; uncharacterized protein; Belongs to the UPF0380 family. | 0.406 |
yfjT | yfjR | b2637 | b2634 | CP4-57 prophage; putative periplasmic protein; To E.coli YkfB. | CP4-57 prophage; putative DNA-binding transcriptional regulator. | 0.611 |
yfjT | yfjS | b2637 | b2636 | CP4-57 prophage; putative periplasmic protein; To E.coli YkfB. | CP4-57 prophage; Does not induce degP when overexpressed unless it is mutated to resemble YafY. | 0.771 |
yfjT | yfjY | b2637 | b2644 | CP4-57 prophage; putative periplasmic protein; To E.coli YkfB. | CP4-57 prophage; Putative DNA repair protein; Belongs to the UPF0758 family. | 0.426 |
yfjT | yhgE | b2637 | b3402 | CP4-57 prophage; putative periplasmic protein; To E.coli YkfB. | DUF4153 family putative inner membrane protein; Putative transport. | 0.800 |
yfjT | ypjK | b2637 | b2635 | CP4-57 prophage; putative periplasmic protein; To E.coli YkfB. | CP4-57 prophage; putative inner membrane protein; To E.coli YkfL. | 0.697 |
yfjY | yfjT | b2644 | b2637 | CP4-57 prophage; Putative DNA repair protein; Belongs to the UPF0758 family. | CP4-57 prophage; putative periplasmic protein; To E.coli YkfB. | 0.426 |
yhgE | yfjT | b3402 | b2637 | DUF4153 family putative inner membrane protein; Putative transport. | CP4-57 prophage; putative periplasmic protein; To E.coli YkfB. | 0.800 |
ypjK | yfjR | b2635 | b2634 | CP4-57 prophage; putative inner membrane protein; To E.coli YkfL. | CP4-57 prophage; putative DNA-binding transcriptional regulator. | 0.639 |
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