STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yqcEPutative mfs transporter, inner membrane protein; Inner membrane protein YqcE; Putative transport protein (425 aa)    
Predicted Functional Partners:
ygcE
Uncharacterized sugar kinase YgcE; Putative enzyme; Not classified; Belongs to the FGGY kinase family
 
     0.917
uacT
Proton-dependent high-capacity transporter for uric acid. Shows also a low capacity for transport of xanthine at 37 degrees Celsius but not at 25 degrees Celsius
   
  
 0.888
yijD
annotation not available
      
 0.887
ygcU
Putative fad-containing dehydrogenase; Belongs to the FAD-binding oxidoreductase/transferase type 4 family
 
    0.801
pheP
Phenylalanine:h(+) symporter phep; Permease that is involved in the transport across the cytoplasmic membrane of phenylalanine
      
 0.735
ygcS
Putative mfs sugar transporter; Inner membrane metabolite transport protein YgcS; Putative transport protein
 
 
   0.678
gltP
Glutamate/aspartate : h(+) symporter gltp; Catalyzes the proton-dependent, binding-protein-independent transport of glutamate and aspartate
     
 0.678
ygcW
Putative deoxygluconate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family
 
    0.647
arnC
Undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase; Catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides
      
 0.640
ygcP
Uncharacterized protein YgcP; Putative anti-terminator regulatory protein
 
     0.557
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.