STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ygcEPutative kinase; Belongs to the FGGY kinase family. (492 aa)    
Predicted Functional Partners:
queE
7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
      
 0.901
yqcE
Putative MFS transporter, inner membrane protein; Putative transport protein.
 
    0.856
ygcU
Putative FAD-linked oxidoreductase; Belongs to the FAD-binding oxidoreductase/transferase type 4 family.
 
  
 0.831
iap
Aminopeptidase in alkaline phosphatase isozyme conversion; This protein, presumably an aminopeptidase, mediates the conversion of E.coli alkaline phosphatase isozyme 1, to isozymes 2 and 3 by removing, one by one, the two N-terminal arginine residues.
      
 0.818
ygcW
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.694
ygcP
Putative anti-terminator regulatory protein.
 
    0.681
yheU
UPF0270 family protein; Belongs to the UPF0270 family.
      
 0.644
essQ
Qin prophage; putative S lysis protein; Belongs to the lambda phage S protein family.
      
 0.622
yjiG
SpmB family inner membrane protein.
 
      0.615
yjiH
Nucleoside recognition pore and gate family putative inner membrane transporter.
 
      0.584
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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