STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yqeKannotation not available (141 aa)    
Predicted Functional Partners:
yjbR
annotation not available
      
 0.736
ygeH
Uncharacterized protein YgeH; Putative invasion protein
   
  
 0.711
yjjU
Probable lipid hydrolase
      
 0.701
yjbQ
Belongs to the UPF0047 family
      
 0.678
wbbI
Involved in the transfer of galactofuranose (Galf) onto an alpha-D-gluco-configured acceptor substrate to form a beta-1,6-linkage. It uses n-octyl alpha-D-glucopyranoside as an acceptor substrate for the addition of galactofuranose from the donor substrate UDP- galactofuranose. It is not able to use beta-D-glucopyranoside isomers.
      
 0.673
yiiS
Belongs to the UPF0381 family
      
 0.610
yjtD
Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
      
 0.607
ynfB
annotation not available
      
 0.604
yjgL
annotation not available
      
 0.603
waaU
Adds the terminal N-acetyl-D-glucosamine group on the glucose(II) group of LPS
      
 0.485
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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