Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| argO | mscS | b2923 | b2924 | Arginine transporter; Involved in the export of arginine. Important to control the intracellular level of arginine and the correct balance between arginine and lysine. May also be involved in the export of canavanine (a plant-derived antimetabolite). | Mechanosensitive channel protein, small conductance; Mechanosensitive channel that participates in the regulation of osmotic pressure changes within the cell, opening in response to stretch forces in the membrane lipid bilayer, without the need for other proteins. Contributes to normal resistance to hypoosmotic shock. Forms an ion channel of 1.0 nanosiemens conductance with a slight preference for anions. The channel is sensitive to voltage; as the membrane is depolarized, less tension is required to open the channel and vice versa. The channel is characterized by short bursts of activ [...] | 0.501 |
| argO | yggE | b2923 | b2922 | Arginine transporter; Involved in the export of arginine. Important to control the intracellular level of arginine and the correct balance between arginine and lysine. May also be involved in the export of canavanine (a plant-derived antimetabolite). | Oxidative stress defense protein; Putative actin. | 0.575 |
| mscS | argO | b2924 | b2923 | Mechanosensitive channel protein, small conductance; Mechanosensitive channel that participates in the regulation of osmotic pressure changes within the cell, opening in response to stretch forces in the membrane lipid bilayer, without the need for other proteins. Contributes to normal resistance to hypoosmotic shock. Forms an ion channel of 1.0 nanosiemens conductance with a slight preference for anions. The channel is sensitive to voltage; as the membrane is depolarized, less tension is required to open the channel and vice versa. The channel is characterized by short bursts of activ [...] | Arginine transporter; Involved in the export of arginine. Important to control the intracellular level of arginine and the correct balance between arginine and lysine. May also be involved in the export of canavanine (a plant-derived antimetabolite). | 0.501 |
| mscS | yggE | b2924 | b2922 | Mechanosensitive channel protein, small conductance; Mechanosensitive channel that participates in the regulation of osmotic pressure changes within the cell, opening in response to stretch forces in the membrane lipid bilayer, without the need for other proteins. Contributes to normal resistance to hypoosmotic shock. Forms an ion channel of 1.0 nanosiemens conductance with a slight preference for anions. The channel is sensitive to voltage; as the membrane is depolarized, less tension is required to open the channel and vice versa. The channel is characterized by short bursts of activ [...] | Oxidative stress defense protein; Putative actin. | 0.562 |
| osmE | uspB | b1739 | b3494 | Osmotically-inducible lipoprotein; Activator of ntrL gene; Protein involved in transcription activator activity, transcription and response to osmotic stress. | Protein involved in response to stress and xenobiotic metabolic process. | 0.430 |
| osmE | ybjP | b1739 | b0865 | Osmotically-inducible lipoprotein; Activator of ntrL gene; Protein involved in transcription activator activity, transcription and response to osmotic stress. | Putative lipoprotein. | 0.404 |
| osmE | yggE | b1739 | b2922 | Osmotically-inducible lipoprotein; Activator of ntrL gene; Protein involved in transcription activator activity, transcription and response to osmotic stress. | Oxidative stress defense protein; Putative actin. | 0.440 |
| osmE | yodD | b1739 | b1953 | Osmotically-inducible lipoprotein; Activator of ntrL gene; Protein involved in transcription activator activity, transcription and response to osmotic stress. | Uncharacterized protein. | 0.583 |
| uspB | osmE | b3494 | b1739 | Protein involved in response to stress and xenobiotic metabolic process. | Osmotically-inducible lipoprotein; Activator of ntrL gene; Protein involved in transcription activator activity, transcription and response to osmotic stress. | 0.430 |
| uspB | yggE | b3494 | b2922 | Protein involved in response to stress and xenobiotic metabolic process. | Oxidative stress defense protein; Putative actin. | 0.406 |
| uspB | yodD | b3494 | b1953 | Protein involved in response to stress and xenobiotic metabolic process. | Uncharacterized protein. | 0.771 |
| ybjP | osmE | b0865 | b1739 | Putative lipoprotein. | Osmotically-inducible lipoprotein; Activator of ntrL gene; Protein involved in transcription activator activity, transcription and response to osmotic stress. | 0.404 |
| ybjP | yggE | b0865 | b2922 | Putative lipoprotein. | Oxidative stress defense protein; Putative actin. | 0.464 |
| yeeX | yggE | b2007 | b2922 | UPF0265 protein YeeX; Pseudogene, CP4-44 putative prophage remnant;Phage or Prophage Related; Belongs to the UPF0265 family. | Oxidative stress defense protein; Putative actin. | 0.472 |
| ygcG | yggE | b2778 | b2922 | TPM domain protein, putative phosphatase. | Oxidative stress defense protein; Putative actin. | 0.508 |
| ygcG | yodD | b2778 | b1953 | TPM domain protein, putative phosphatase. | Uncharacterized protein. | 0.544 |
| ygfI | yggE | b2921 | b2922 | Putative transcriptional regulator LYSR-type; Protein involved in transcription activator activity, transcription repressor activity and transcription; Belongs to the LysR transcriptional regulatory family. | Oxidative stress defense protein; Putative actin. | 0.481 |
| yggE | argO | b2922 | b2923 | Oxidative stress defense protein; Putative actin. | Arginine transporter; Involved in the export of arginine. Important to control the intracellular level of arginine and the correct balance between arginine and lysine. May also be involved in the export of canavanine (a plant-derived antimetabolite). | 0.575 |
| yggE | mscS | b2922 | b2924 | Oxidative stress defense protein; Putative actin. | Mechanosensitive channel protein, small conductance; Mechanosensitive channel that participates in the regulation of osmotic pressure changes within the cell, opening in response to stretch forces in the membrane lipid bilayer, without the need for other proteins. Contributes to normal resistance to hypoosmotic shock. Forms an ion channel of 1.0 nanosiemens conductance with a slight preference for anions. The channel is sensitive to voltage; as the membrane is depolarized, less tension is required to open the channel and vice versa. The channel is characterized by short bursts of activ [...] | 0.562 |
| yggE | osmE | b2922 | b1739 | Oxidative stress defense protein; Putative actin. | Osmotically-inducible lipoprotein; Activator of ntrL gene; Protein involved in transcription activator activity, transcription and response to osmotic stress. | 0.440 |
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