STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ygiLPutative fimbrial-like protein. (183 aa)    
Predicted Functional Partners:
yghS
Putative ATP-binding protein; To E.coli YghR and YghT.
   
  
 0.858
yghT
Putative ATP-binding protein; To E.coli YghR and YghS.
   
  
 0.845
yadN
Putative fimbrial-like adhesin protein; Part of the yadCKLM-htrE-yadVN fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches.
   
  
 0.817
ytfB
Cell division protein YtfB; Cell division protein whose function is related to the generation of a transient cell wall structure. Function is linked to the late stages of cell division.
    
 
 0.790
ybgP
Putative periplasmic pilin chaperone; Could be required for the biogenesis of the putative YbgD fimbria; Belongs to the periplasmic pilus chaperone family.
   
 
 0.776
gltF
Periplasmic protein; Involved in induction of the so-called NTR enzymes in response to nitrogen deprivation, as well as in glutamate biosynthesis. May mediate the glutamate-dependent repression of the GLT operon.
   
  
 0.649
yheT
UPF0017 family putative hydrolase; Belongs to the AB hydrolase superfamily. AB hydrolase 4 family.
      
 0.645
yraH
Putative fimbrial-like adhesin protein; Part of the yraHIJK fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches. Increases adhesion to eukaryotic T24 bladder epithelial cells in the absence of fim operon.
   
  
 0.634
yaiS
Putative PIG-L family deacetylase; Belongs to the PIGL family.
   
    0.632
yehC
Putative periplasmic pilin chaperone; Part of the yehABCD fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches.
   
 
 0.596
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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