STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhgNannotation not available (197 aa)    
Predicted Functional Partners:
frvX
Putative aminopeptidase FrvX; Frv operon protein; Protein involved in polysaccharide catabolic process
      
 0.921
yidX
Uncharacterized protein YidX; Putative replicase EC 2.7.-
      
 0.901
ybaN
Inner membrane protein YbaN; Orf; Not classified
      
 0.855
rutG
Putative pyrimidine permease RutG; May function as a proton-driven pyrimidine uptake system
      
 0.834
btuE
Thioredoxin/glutathione peroxidase BtuE; Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent. In vitro, utilizes preferentially thioredoxin A to decompose hydrogen peroxide as well as cumene-, tert-butyl-, and linoleic acid hydroperoxides, suggesting that it may have one or more organic hydroperoxide as its physiological substrate; Belongs to the glutathione peroxidase family. BtuE subfamily
      
 0.751
focA
Probable formate transporter 1; Involved in the bidirectional transport of formate
      
 0.639
ymfI
Uncharacterized protein YmfI; Phage or Prophage Related
      
 0.623
gabT
4-aminobutyrate aminotransferase GabT; Catalyzes the transfer of the amino group from gamma- aminobutyrate (GABA) to alpha-ketoglutarate (KG) to yield succinic semialdehyde (SSA); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
      
 0.621
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
       0.598
cohE
Prophage repressor CohE; Phage or Prophage Related
      
 0.430
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
Server load: low (13%) [HD]