STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
insB1-6IS1 transposase B. (167 aa)    
Predicted Functional Partners:
insA-5
Pseudogene, interrupted by IS1E.
 
   
 0.979
insA
IS1 repressor TnpA; Absolutely required for transposition of IS1.
 
  
 0.955
insB1-4
IS1 transposase B; Absolutely required for transposition of IS1.
  
   
0.948
insA-2
IS1 repressor TnpA; Absolutely required for transposition of IS1.
 
  
 0.947
insA-3
IS1 repressor TnpA.
 
  
 0.939
insA-6
IS1 repressor TnpA; Absolutely required for transposition of IS1.
 
  
 0.914
insA-4
IS1 repressor TnpA.
 
   
 0.911
insA-7
IS1 repressor TnpA.
 
   
 0.911
insB1
IS1 transposase B; Absolutely required for transposition of IS1.
  
   
0.805
insB1-3
Pseudogene.
  
   
0.749
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.