STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
insKIS150 transposase B; Involved in the transposition of the insertion sequence IS150; Belongs to the transposase IS3/IS150/IS904 family. (283 aa)    
Predicted Functional Partners:
insJ
IS150 transposase A; Belongs to the IS150/IS1296 orfA family.
 
  
 0.996
yhhX
Putative regulator; Belongs to the Gfo/Idh/MocA family. Biliverdin reductase subfamily.
   
  
 0.734
yccE
Uncharacterized protein.
      
 0.732
yagL
CP4-6 prophage; DNA-binding protein.
  
  
 0.633
dsdX
D-serine transporter; A D-serine-specific transporter, may function as a H(+) symporter.
      
 0.620
yejM
Essential inner membrane DUF3413 domain-containing protein; Putative sulfatase.
      
 0.600
hokA
Protein HokA; Toxic component of a type I toxin-antitoxin (TA) system (Probable). When overexpressed kills cells within minutes; causes collapse of the transmembrane potential and arrest of respiration. Its toxic effect is probably neutralized by antisense antitoxin RNA SokA. Belongs to the Hok/Gef family.
       0.552
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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