STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yibGUncharacterized protein YibG; Rhs-family protein. (153 aa)    
Predicted Functional Partners:
yhhH
Putative NTF2 fold immunity protein for polymorphic toxin RhsB.
   
    0.739
yfjP
CP4-57 prophage; Putative GTP-binding protein; To E.coli YkfA and YeeP.
  
  
 0.656
yibA
Putative immunity protein for polymorphic toxin RhsA; HEAT-domain protein; lethality reduction protein.
   
  
 0.655
ybfB
Putative membrane protein.
   
    0.645
ybcK
DLP12 prophage; putative recombinase.
   
    0.632
ydcH
DUF465 family protein.
      
 0.623
yjcO
Sel1 family TPR-like repeat protein.
      
 0.623
ybfC
Uncharacterized protein YbfC; Pseudogene, Rhs family.
   
    0.540
yjgN
DUF898 family inner membrane protein.
   
  
 0.535
yhdZ
Putative amino acid ABC transporter ATPase; Probably part of a binding-protein-dependent transport system YdhWXYZ for an amino acid. Probably responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily.
      
 0.523
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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