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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
waaUPutative adp-heptose:lps heptosyltransferase 4; Adds the terminal N-acetyl-D-glucosamine group on the glucose(II) group of LPS (357 aa)    
Predicted Functional Partners:
waaR
Udp-glucose/galactose:(glucosyl)lps alpha-1,2-glucosyl/galactosyltransferase; Adds the glucose(II) group on the galactose(I) group of LPS
 
 0.995
waaZ
Lipopolysaccharide core biosynthesis; Protein involved in cell surface antigen activity, host-interacting and lipopolysaccharide core region biosynthetic process
 
  
 0.991
waaY
Lipopolysaccharide core biosynthesis protein; Catalyzes the phosphorylation of heptose(II) of the outer membrane lipopolysaccharide core
 
 
 0.975
waaB
UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Adds a galactose goup to a glucose group of LPS
 
 
 0.973
waaL
O-antigen ligase; Adds the O-antigen on the glucose group of LPS
 
  
 0.964
waaS
Lipopolysaccharide rhamnose:kdoiii transferase; Lipopolysaccharide core biosynthesis; Protein involved in cell surface antigen activity, host-interacting and lipopolysaccharide core region biosynthetic process
 
 
 0.961
waaO
Udp-d-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-d-galactosyltransferase; Belongs to the glycosyltransferase 8 family
 
 
 0.953
waaQ
Lipopolysaccharide core heptosyltransferase 3; Catalyzes heptose transfer to the lipopolysaccharide core. It transfers a heptose, called heptose(III), to the heptose(II) of the inner core (By similarity)
 
 
 0.907
waaG
Udp-glucose:(heptosyl)lipopolysaccharide alpha-1,3-glucosyltransferase; Involved in the addition of the first glucose residue to the lipopolysaccharide core
  
 
 0.895
waaP
Kinase that phosphorylates core heptose of lipopolysaccharide; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core
  
 
 0.874
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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