STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ivbLilvB operon leader peptide; This protein is involved in control of the biosynthesis of isoleucine, leucine, and valine. (32 aa)    
Predicted Functional Partners:
ilvB
Acetolactate synthase I,valine-sensitive, large subunit.
  
  
 0.862
ilvL
ilvGEDA operon leader peptide.
   
  
 0.815
ilvN
Acetolactate synthase I, valine sensitive, small subunit.
  
  
 0.794
leuL
Leu operon leader peptide; Involved in control of the biosynthesis of leucine.
   
  
 0.739
hisL
His operon leader peptide; Protein involved in histidine biosynthetic process.
   
  
 0.738
thrL
Thr operon leader peptide; This protein is involved in control of the biosynthesis of threonine.
   
  
 0.667
uof
ryhB-regulated fur leader peptide; Cotranscribed with fur, it is essential for fur translation. The fur ribosomal binding site (RBS) is occluded by the 5'-mRNA secondary structure, which is opened by uof translation.
      
 0.644
trpL
Trp operon leader peptide; This protein is involved in control of the biosynthesis of tryptophan.
      
 0.624
pheL
Leader peptide of chorismate mutase-P-prephenate dehydratase; Protein involved in L-phenylalanine biosynthetic process.
      
 0.622
pheM
phenylalanyl-tRNA synthetase (pheST) operon leader peptide; Protein involved in tRNA aminoacylation for protein translation.
      
 0.521
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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