STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ilvLIlvxgmeda operon leader peptide; ilvGEDA operon leader peptide (32 aa)    
Predicted Functional Partners:
yifB
Magnesium chelatase family protein and putative transcriptional regulator; Belongs to the Mg-chelatase subunits D/I family. ComM subfamily
     
 0.876
ivbL
Ilvbn operon leader peptide; This protein is involved in control of the biosynthesis of isoleucine, leucine, and valine
   
  
 0.823
ygaH
annotation not available
      
 0.677
ilvH
Acetolactate synthase/acetohydroxybutanoate synthase, regulatory subunit; Belongs to the acetolactate synthase small subunit family
      
 0.602
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. It also catalyzes the conversion between beta- allofuranose and beta-allopyranose
      
 0.580
yifE
Macrodomain ori protein; Belongs to the UPF0438 family
      
 0.566
ilvB
Acetolactate synthase I,valine-sensitive, large subunit; Belongs to the TPP enzyme family
      
 0.480
yfjJ
Uncharacterized protein YfjJ; Phage or Prophage Related; To E.coli YagK
      
 0.476
yciI
annotation not available
      
 0.475
yoaB
Putative reactive intermediate deaminase; RutC family protein YoaB; Putative enzyme; Not classified; Belongs to the RutC family
      
 0.472
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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