Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| btuB | kdpB | b3966 | b0697 | Vitamin b12/cobalamin outer membrane transporter; Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans- periplasmic membrane protein TonB. Is also a receptor for bacteriophages BF23 and C1, and for A and E colicins | Potassium-transporting atpase atp-binding subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm This subunit is responsible for energy coupling to the transport system | 0.727 |
| btuB | yiiX | b3966 | b3937 | Vitamin b12/cobalamin outer membrane transporter; Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans- periplasmic membrane protein TonB. Is also a receptor for bacteriophages BF23 and C1, and for A and E colicins | Putative lipid binding hydrolase, duf830 family protein; To E.coli YebB | 0.712 |
| djlC | yiiX | b0649 | b3937 | Uncharacterized J domain-containing protein DjlC; Factor; Chaperones | Putative lipid binding hydrolase, duf830 family protein; To E.coli YebB | 0.744 |
| kdpB | btuB | b0697 | b3966 | Potassium-transporting atpase atp-binding subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm This subunit is responsible for energy coupling to the transport system | Vitamin b12/cobalamin outer membrane transporter; Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans- periplasmic membrane protein TonB. Is also a receptor for bacteriophages BF23 and C1, and for A and E colicins | 0.727 |
| kdpB | yiiX | b0697 | b3937 | Potassium-transporting atpase atp-binding subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm This subunit is responsible for energy coupling to the transport system | Putative lipid binding hydrolase, duf830 family protein; To E.coli YebB | 0.653 |
| yadL | yciZ | b0137 | b4596 | Putative fimbrial-like adhesin protein; Part of the yadCKLM-htrE-yadVN fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches | annotation not available | 0.700 |
| yadL | ydcA | b0137 | b1419 | Putative fimbrial-like adhesin protein; Part of the yadCKLM-htrE-yadVN fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches | annotation not available | 0.679 |
| yadL | ydgC | b0137 | b1607 | Putative fimbrial-like adhesin protein; Part of the yadCKLM-htrE-yadVN fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches | annotation not available | 0.731 |
| yadL | yiiX | b0137 | b3937 | Putative fimbrial-like adhesin protein; Part of the yadCKLM-htrE-yadVN fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches | Putative lipid binding hydrolase, duf830 family protein; To E.coli YebB | 0.780 |
| yadL | yjbT | b0137 | b4620 | Putative fimbrial-like adhesin protein; Part of the yadCKLM-htrE-yadVN fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches | Putative periplasmic protein; Belongs to the YjbT family | 0.732 |
| yadL | yjiM | b0137 | b4335 | Putative fimbrial-like adhesin protein; Part of the yadCKLM-htrE-yadVN fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches | Putative 2-hydroxyglutaryl-coa dehydratase; Belongs to the FldB/FldC dehydratase alpha/beta subunit family | 0.732 |
| yaeF | yiiX | b0193 | b3937 | annotation not available | Putative lipid binding hydrolase, duf830 family protein; To E.coli YebB | 0.959 |
| yciZ | yadL | b4596 | b0137 | annotation not available | Putative fimbrial-like adhesin protein; Part of the yadCKLM-htrE-yadVN fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches | 0.700 |
| yciZ | ydcA | b4596 | b1419 | annotation not available | annotation not available | 0.826 |
| yciZ | ydgC | b4596 | b1607 | annotation not available | annotation not available | 0.858 |
| yciZ | yiiX | b4596 | b3937 | annotation not available | Putative lipid binding hydrolase, duf830 family protein; To E.coli YebB | 0.731 |
| yciZ | yjbT | b4596 | b4620 | annotation not available | Putative periplasmic protein; Belongs to the YjbT family | 0.871 |
| yciZ | yjiM | b4596 | b4335 | annotation not available | Putative 2-hydroxyglutaryl-coa dehydratase; Belongs to the FldB/FldC dehydratase alpha/beta subunit family | 0.871 |
| ydcA | yadL | b1419 | b0137 | annotation not available | Putative fimbrial-like adhesin protein; Part of the yadCKLM-htrE-yadVN fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches | 0.679 |
| ydcA | yciZ | b1419 | b4596 | annotation not available | annotation not available | 0.826 |
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