Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cbrA | ycfT | b3690 | b1115 | Colicin M resistance protein; FAD-binding protein, putative oxidoreductase; Belongs to the CbrA family. | Inner membrane protein. | 0.751 |
cbrA | yjbG | b3690 | b4028 | Colicin M resistance protein; FAD-binding protein, putative oxidoreductase; Belongs to the CbrA family. | Extracellular polysaccharide export OMA protein; To E.coli YmcB. | 0.801 |
cbrA | ymgD | b3690 | b1171 | Colicin M resistance protein; FAD-binding protein, putative oxidoreductase; Belongs to the CbrA family. | Uncharacterized protein YmgD; Pseudogene; putative ATP-binding component of a transport system. | 0.507 |
cbrA | ymgG | b3690 | b1172 | Colicin M resistance protein; FAD-binding protein, putative oxidoreductase; Belongs to the CbrA family. | UPF0757 family protein. | 0.477 |
gfcB | gfcD | b0986 | b0984 | O-antigen capsule production lipoprotein; Putative regulator. | Putative O-antigen capsule production periplasmic protein. | 0.991 |
gfcB | wcaK | b0986 | b2045 | O-antigen capsule production lipoprotein; Putative regulator. | Putative galactokinase; Protein involved in colanic acid biosynthetic process. | 0.468 |
gfcB | ycfT | b0986 | b1115 | O-antigen capsule production lipoprotein; Putative regulator. | Inner membrane protein. | 0.565 |
gfcB | yjbG | b0986 | b4028 | O-antigen capsule production lipoprotein; Putative regulator. | Extracellular polysaccharide export OMA protein; To E.coli YmcB. | 0.807 |
gfcB | yjbH | b0986 | b4029 | O-antigen capsule production lipoprotein; Putative regulator. | DUF940 family extracellular polysaccharide protein. | 0.900 |
gfcD | gfcB | b0984 | b0986 | Putative O-antigen capsule production periplasmic protein. | O-antigen capsule production lipoprotein; Putative regulator. | 0.991 |
gfcD | wcaK | b0984 | b2045 | Putative O-antigen capsule production periplasmic protein. | Putative galactokinase; Protein involved in colanic acid biosynthetic process. | 0.502 |
gfcD | yjbG | b0984 | b4028 | Putative O-antigen capsule production periplasmic protein. | Extracellular polysaccharide export OMA protein; To E.coli YmcB. | 0.825 |
wcaK | gfcB | b2045 | b0986 | Putative galactokinase; Protein involved in colanic acid biosynthetic process. | O-antigen capsule production lipoprotein; Putative regulator. | 0.468 |
wcaK | gfcD | b2045 | b0984 | Putative galactokinase; Protein involved in colanic acid biosynthetic process. | Putative O-antigen capsule production periplasmic protein. | 0.502 |
wcaK | ycfT | b2045 | b1115 | Putative galactokinase; Protein involved in colanic acid biosynthetic process. | Inner membrane protein. | 0.423 |
wcaK | yjbG | b2045 | b4028 | Putative galactokinase; Protein involved in colanic acid biosynthetic process. | Extracellular polysaccharide export OMA protein; To E.coli YmcB. | 0.747 |
wcaK | yjbH | b2045 | b4029 | Putative galactokinase; Protein involved in colanic acid biosynthetic process. | DUF940 family extracellular polysaccharide protein. | 0.714 |
ycfT | cbrA | b1115 | b3690 | Inner membrane protein. | Colicin M resistance protein; FAD-binding protein, putative oxidoreductase; Belongs to the CbrA family. | 0.751 |
ycfT | gfcB | b1115 | b0986 | Inner membrane protein. | O-antigen capsule production lipoprotein; Putative regulator. | 0.565 |
ycfT | wcaK | b1115 | b2045 | Inner membrane protein. | Putative galactokinase; Protein involved in colanic acid biosynthetic process. | 0.423 |
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