Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| bsmA | csiE | b4189 | b2535 | DUF1471 domain-containing putative lipoprotein BsmA; Involved in protection of biofilms against oxidative stress | annotation not available | 0.772 |
| bsmA | rclB | b4189 | b0303 | DUF1471 domain-containing putative lipoprotein BsmA; Involved in protection of biofilms against oxidative stress | Reactive chlorine species (rcs) stress resistance periplasmic protein; Probably involved in reactive chlorine species (RCS) stress resistance | 0.784 |
| bsmA | ybiJ | b4189 | b0802 | DUF1471 domain-containing putative lipoprotein BsmA; Involved in protection of biofilms against oxidative stress | annotation not available | 0.691 |
| bsmA | ydgH | b4189 | b1604 | DUF1471 domain-containing putative lipoprotein BsmA; Involved in protection of biofilms against oxidative stress | DUF1471 domain-containing protein YdgH; To E.coli YjfY | 0.793 |
| bsmA | yhcN | b4189 | b3238 | DUF1471 domain-containing putative lipoprotein BsmA; Involved in protection of biofilms against oxidative stress | annotation not available | 0.778 |
| bsmA | yjfN | b4189 | b4188 | DUF1471 domain-containing putative lipoprotein BsmA; Involved in protection of biofilms against oxidative stress | annotation not available | 0.989 |
| bsmA | yjfY | b4189 | b4199 | DUF1471 domain-containing putative lipoprotein BsmA; Involved in protection of biofilms against oxidative stress | annotation not available | 0.865 |
| csiE | bsmA | b2535 | b4189 | annotation not available | DUF1471 domain-containing putative lipoprotein BsmA; Involved in protection of biofilms against oxidative stress | 0.772 |
| csiE | pspD | b2535 | b1307 | annotation not available | Peripheral inner membrane phage-shock protein; The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions | 0.748 |
| csiE | yhcN | b2535 | b3238 | annotation not available | annotation not available | 0.708 |
| csiE | yjfN | b2535 | b4188 | annotation not available | annotation not available | 0.802 |
| csiE | ypeC | b2535 | b2390 | annotation not available | DUF2502 family putative periplasmic protein; To E.coli YaaX | 0.677 |
| pspD | csiE | b1307 | b2535 | Peripheral inner membrane phage-shock protein; The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions | annotation not available | 0.748 |
| pspD | ydiH | b1307 | b1685 | Peripheral inner membrane phage-shock protein; The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions | annotation not available | 0.454 |
| pspD | yhcN | b1307 | b3238 | Peripheral inner membrane phage-shock protein; The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions | annotation not available | 0.501 |
| pspD | yjfN | b1307 | b4188 | Peripheral inner membrane phage-shock protein; The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions | annotation not available | 0.770 |
| pspD | ypeC | b1307 | b2390 | Peripheral inner membrane phage-shock protein; The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions | DUF2502 family putative periplasmic protein; To E.coli YaaX | 0.767 |
| rclB | bsmA | b0303 | b4189 | Reactive chlorine species (rcs) stress resistance periplasmic protein; Probably involved in reactive chlorine species (RCS) stress resistance | DUF1471 domain-containing putative lipoprotein BsmA; Involved in protection of biofilms against oxidative stress | 0.784 |
| rclB | ybiJ | b0303 | b0802 | Reactive chlorine species (rcs) stress resistance periplasmic protein; Probably involved in reactive chlorine species (RCS) stress resistance | annotation not available | 0.840 |
| rclB | ydgH | b0303 | b1604 | Reactive chlorine species (rcs) stress resistance periplasmic protein; Probably involved in reactive chlorine species (RCS) stress resistance | DUF1471 domain-containing protein YdgH; To E.coli YjfY | 0.781 |
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STRING Database User Survey
