Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
bhsA | bsmA | b1112 | b4189 | DUF1471 domain-containing multiple stress resistance outer membrane protein BhsA; Reduces the permeability of the outer membrane to copper. Seems to be involved in the regulation of biofilm formation. May decrease biofilm formation by repressing cell-cell interaction and cell surface interaction | DUF1471 domain-containing putative lipoprotein BsmA; Involved in protection of biofilms against oxidative stress | 0.768 |
bhsA | rclB | b1112 | b0303 | DUF1471 domain-containing multiple stress resistance outer membrane protein BhsA; Reduces the permeability of the outer membrane to copper. Seems to be involved in the regulation of biofilm formation. May decrease biofilm formation by repressing cell-cell interaction and cell surface interaction | Reactive chlorine species (rcs) stress resistance periplasmic protein; Probably involved in reactive chlorine species (RCS) stress resistance | 0.619 |
bhsA | ydgH | b1112 | b1604 | DUF1471 domain-containing multiple stress resistance outer membrane protein BhsA; Reduces the permeability of the outer membrane to copper. Seems to be involved in the regulation of biofilm formation. May decrease biofilm formation by repressing cell-cell interaction and cell surface interaction | DUF1471 domain-containing protein YdgH; To E.coli YjfY | 0.751 |
bhsA | yhcN | b1112 | b3238 | DUF1471 domain-containing multiple stress resistance outer membrane protein BhsA; Reduces the permeability of the outer membrane to copper. Seems to be involved in the regulation of biofilm formation. May decrease biofilm formation by repressing cell-cell interaction and cell surface interaction | annotation not available | 0.797 |
bhsA | yjfN | b1112 | b4188 | DUF1471 domain-containing multiple stress resistance outer membrane protein BhsA; Reduces the permeability of the outer membrane to copper. Seems to be involved in the regulation of biofilm formation. May decrease biofilm formation by repressing cell-cell interaction and cell surface interaction | annotation not available | 0.631 |
bhsA | yjfY | b1112 | b4199 | DUF1471 domain-containing multiple stress resistance outer membrane protein BhsA; Reduces the permeability of the outer membrane to copper. Seems to be involved in the regulation of biofilm formation. May decrease biofilm formation by repressing cell-cell interaction and cell surface interaction | annotation not available | 0.856 |
bsmA | bhsA | b4189 | b1112 | DUF1471 domain-containing putative lipoprotein BsmA; Involved in protection of biofilms against oxidative stress | DUF1471 domain-containing multiple stress resistance outer membrane protein BhsA; Reduces the permeability of the outer membrane to copper. Seems to be involved in the regulation of biofilm formation. May decrease biofilm formation by repressing cell-cell interaction and cell surface interaction | 0.768 |
bsmA | csiE | b4189 | b2535 | DUF1471 domain-containing putative lipoprotein BsmA; Involved in protection of biofilms against oxidative stress | annotation not available | 0.772 |
bsmA | dcrB | b4189 | b3472 | DUF1471 domain-containing putative lipoprotein BsmA; Involved in protection of biofilms against oxidative stress | Periplasmic bacteriophage sensitivity protein dcrb; Required for phage C1 adsorption | 0.762 |
bsmA | pspG | b4189 | b4050 | DUF1471 domain-containing putative lipoprotein BsmA; Involved in protection of biofilms against oxidative stress | Phage shock protein g; Effector of the phage shock response | 0.748 |
bsmA | rclB | b4189 | b0303 | DUF1471 domain-containing putative lipoprotein BsmA; Involved in protection of biofilms against oxidative stress | Reactive chlorine species (rcs) stress resistance periplasmic protein; Probably involved in reactive chlorine species (RCS) stress resistance | 0.784 |
bsmA | ychH | b4189 | b1205 | DUF1471 domain-containing putative lipoprotein BsmA; Involved in protection of biofilms against oxidative stress | annotation not available | 0.785 |
bsmA | ydgH | b4189 | b1604 | DUF1471 domain-containing putative lipoprotein BsmA; Involved in protection of biofilms against oxidative stress | DUF1471 domain-containing protein YdgH; To E.coli YjfY | 0.793 |
bsmA | yhcN | b4189 | b3238 | DUF1471 domain-containing putative lipoprotein BsmA; Involved in protection of biofilms against oxidative stress | annotation not available | 0.778 |
bsmA | yjfN | b4189 | b4188 | DUF1471 domain-containing putative lipoprotein BsmA; Involved in protection of biofilms against oxidative stress | annotation not available | 0.989 |
bsmA | yjfY | b4189 | b4199 | DUF1471 domain-containing putative lipoprotein BsmA; Involved in protection of biofilms against oxidative stress | annotation not available | 0.865 |
csiE | bsmA | b2535 | b4189 | annotation not available | DUF1471 domain-containing putative lipoprotein BsmA; Involved in protection of biofilms against oxidative stress | 0.772 |
csiE | yhcN | b2535 | b3238 | annotation not available | annotation not available | 0.708 |
csiE | yjfN | b2535 | b4188 | annotation not available | annotation not available | 0.802 |
dcrB | bsmA | b3472 | b4189 | Periplasmic bacteriophage sensitivity protein dcrb; Required for phage C1 adsorption | DUF1471 domain-containing putative lipoprotein BsmA; Involved in protection of biofilms against oxidative stress | 0.762 |
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