STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bsmADUF1471 domain-containing putative lipoprotein BsmA; Involved in protection of biofilms against oxidative stress (109 aa)    
Predicted Functional Partners:
yjfN
annotation not available
 
  
 0.989
yjfY
annotation not available
  
   
 0.865
ydgH
DUF1471 domain-containing protein YdgH; To E.coli YjfY
  
   
 0.793
ychH
annotation not available
  
  
 0.785
rclB
Reactive chlorine species (rcs) stress resistance periplasmic protein; Probably involved in reactive chlorine species (RCS) stress resistance
      
 0.784
yhcN
annotation not available
  
   
 0.778
csiE
annotation not available
  
  
 0.772
bhsA
DUF1471 domain-containing multiple stress resistance outer membrane protein BhsA; Reduces the permeability of the outer membrane to copper. Seems to be involved in the regulation of biofilm formation. May decrease biofilm formation by repressing cell-cell interaction and cell surface interaction
  
   
 0.768
dcrB
Periplasmic bacteriophage sensitivity protein dcrb; Required for phage C1 adsorption
  
     0.762
pspG
Phage shock protein g; Effector of the phage shock response
  
     0.748
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
Server load: low (14%) [HD]