Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
insC1 | insC1-2 | b0360 | b1403 | Transposase InsC for insertion element IS2-10; Involved in the transposition of the insertion sequence IS2. | IS2 repressor TnpA. | 0.808 |
insC1 | insC1-4 | b0360 | b2861 | Transposase InsC for insertion element IS2-10; Involved in the transposition of the insertion sequence IS2. | IS2 repressor TnpA. | 0.529 |
insC1 | insC1-5 | b0360 | b3044 | Transposase InsC for insertion element IS2-10; Involved in the transposition of the insertion sequence IS2. | Pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein. | 0.503 |
insC1 | insD1-6 | b0360 | b4273 | Transposase InsC for insertion element IS2-10; Involved in the transposition of the insertion sequence IS2. | IS2 transposase TnpB. | 0.911 |
insC1 | insI1-2 | b0360 | b1404 | Transposase InsC for insertion element IS2-10; Involved in the transposition of the insertion sequence IS2. | IS30 transposase; Required for the transposition of the insertion element. | 0.542 |
insC1 | insI1-3 | b0360 | b4284 | Transposase InsC for insertion element IS2-10; Involved in the transposition of the insertion sequence IS2. | Pseudogene, IS911 transposase B;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related. | 0.645 |
insC1 | ynbC | b0360 | b1410 | Transposase InsC for insertion element IS2-10; Involved in the transposition of the insertion sequence IS2. | Putative esterase. | 0.623 |
insC1 | ynbD | b0360 | b1411 | Transposase InsC for insertion element IS2-10; Involved in the transposition of the insertion sequence IS2. | Putative phosphatase inner membrane protein; Putative enzymes; Belongs to the protein-tyrosine phosphatase family. | 0.510 |
insC1-2 | insC1 | b1403 | b0360 | IS2 repressor TnpA. | Transposase InsC for insertion element IS2-10; Involved in the transposition of the insertion sequence IS2. | 0.808 |
insC1-2 | insC1-4 | b1403 | b2861 | IS2 repressor TnpA. | IS2 repressor TnpA. | 0.734 |
insC1-2 | insC1-5 | b1403 | b3044 | IS2 repressor TnpA. | Pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein. | 0.738 |
insC1-2 | insD1-6 | b1403 | b4273 | IS2 repressor TnpA. | IS2 transposase TnpB. | 0.976 |
insC1-2 | insI1-2 | b1403 | b1404 | IS2 repressor TnpA. | IS30 transposase; Required for the transposition of the insertion element. | 0.800 |
insC1-2 | insI1-3 | b1403 | b4284 | IS2 repressor TnpA. | Pseudogene, IS911 transposase B;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related. | 0.735 |
insC1-2 | ynbC | b1403 | b1410 | IS2 repressor TnpA. | Putative esterase. | 0.645 |
insC1-2 | ynbD | b1403 | b1411 | IS2 repressor TnpA. | Putative phosphatase inner membrane protein; Putative enzymes; Belongs to the protein-tyrosine phosphatase family. | 0.529 |
insC1-3 | insC1-6 | b1997 | b4272 | IS2 repressor TnpA. | Pseudogene, integrase homology;IS, phage, Tn; Phage-related functions and prophages; KpLE2 phage-like element; P4-like integrase. | 0.797 |
insC1-3 | insD1-6 | b1997 | b4273 | IS2 repressor TnpA. | IS2 transposase TnpB. | 0.976 |
insC1-3 | insI1-2 | b1997 | b1404 | IS2 repressor TnpA. | IS30 transposase; Required for the transposition of the insertion element. | 0.621 |
insC1-3 | insI1-3 | b1997 | b4284 | IS2 repressor TnpA. | Pseudogene, IS911 transposase B;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related. | 0.735 |
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