Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
fecI | insA-6 | b4293 | b4294 | RNA polymerase sigma-19 factor, fec operon-specific; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor regulates the fec genes for iron dicitrate transport (Probable); Belongs to the sigma-70 factor family. ECF subfamily. | IS1 repressor TnpA; Absolutely required for transposition of IS1. | 0.532 |
insA-6 | fecI | b4294 | b4293 | IS1 repressor TnpA; Absolutely required for transposition of IS1. | RNA polymerase sigma-19 factor, fec operon-specific; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor regulates the fec genes for iron dicitrate transport (Probable); Belongs to the sigma-70 factor family. ECF subfamily. | 0.532 |
insA-6 | insB1 | b4294 | b0021 | IS1 repressor TnpA; Absolutely required for transposition of IS1. | IS1 transposase B; Absolutely required for transposition of IS1. | 0.908 |
insA-6 | insB1-2 | b4294 | b0264 | IS1 repressor TnpA; Absolutely required for transposition of IS1. | Insertion element IS1 2 protein InsB; Absolutely required for transposition of IS1. | 0.900 |
insA-6 | insB1-3 | b4294 | b0274 | IS1 repressor TnpA; Absolutely required for transposition of IS1. | Pseudogene. | 0.920 |
insA-6 | insB1-4 | b4294 | b0988 | IS1 repressor TnpA; Absolutely required for transposition of IS1. | IS1 transposase B; Absolutely required for transposition of IS1. | 0.958 |
insA-6 | insB1-5 | b4294 | b1893 | IS1 repressor TnpA; Absolutely required for transposition of IS1. | IS1 transposase B. | 0.917 |
insA-6 | insB1-6 | b4294 | b3445 | IS1 repressor TnpA; Absolutely required for transposition of IS1. | IS1 transposase B. | 0.914 |
insA-6 | insH1 | b4294 | b0259 | IS1 repressor TnpA; Absolutely required for transposition of IS1. | Transposase InsH for insertion sequence element IS5R; Involved in the transposition of the insertion sequence IS5. | 0.529 |
insA-6 | insH1-10 | b4294 | b3218 | IS1 repressor TnpA; Absolutely required for transposition of IS1. | Pseudogene fragment; interrupted by IS5. | 0.530 |
insA-6 | insH1-5 | b4294 | b1370 | IS1 repressor TnpA; Absolutely required for transposition of IS1. | Transposase InsH for insertion sequence element IS5Y; Involved in the transposition of the insertion sequence IS5. | 0.626 |
insB1 | insA-6 | b0021 | b4294 | IS1 transposase B; Absolutely required for transposition of IS1. | IS1 repressor TnpA; Absolutely required for transposition of IS1. | 0.908 |
insB1 | insB1-2 | b0021 | b0264 | IS1 transposase B; Absolutely required for transposition of IS1. | Insertion element IS1 2 protein InsB; Absolutely required for transposition of IS1. | 0.795 |
insB1 | insB1-3 | b0021 | b0274 | IS1 transposase B; Absolutely required for transposition of IS1. | Pseudogene. | 0.926 |
insB1 | insB1-4 | b0021 | b0988 | IS1 transposase B; Absolutely required for transposition of IS1. | IS1 transposase B; Absolutely required for transposition of IS1. | 0.999 |
insB1 | insB1-5 | b0021 | b1893 | IS1 transposase B; Absolutely required for transposition of IS1. | IS1 transposase B. | 0.955 |
insB1 | insB1-6 | b0021 | b3445 | IS1 transposase B; Absolutely required for transposition of IS1. | IS1 transposase B. | 0.805 |
insB1 | insH1 | b0021 | b0259 | IS1 transposase B; Absolutely required for transposition of IS1. | Transposase InsH for insertion sequence element IS5R; Involved in the transposition of the insertion sequence IS5. | 0.508 |
insB1 | insH1-10 | b0021 | b3218 | IS1 transposase B; Absolutely required for transposition of IS1. | Pseudogene fragment; interrupted by IS5. | 0.511 |
insB1 | insH1-5 | b0021 | b1370 | IS1 transposase B; Absolutely required for transposition of IS1. | Transposase InsH for insertion sequence element IS5Y; Involved in the transposition of the insertion sequence IS5. | 0.514 |
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