STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjjAPutative duf2501 family periplasmic protein; Uncharacterized protein YjjA; Putative glycoprotein/receptor (164 aa)    
Predicted Functional Partners:
yjjB
annotation not available
     
 0.903
dnaT
Dna biosynthesis protein (primosomal protein i); This protein is required for primosome-dependent normal DNA replication; it is also involved in inducing stable DNA replication during SOS response. It forms, in concert with DnaB protein and other prepriming proteins DnaC, N, N', N'' a prepriming protein complex on the specific site of the template DNA recognized by protein N'
 
  
 0.858
dnaC
Dna replication protein dnac; This protein is required for chromosomal replication. It forms, in concert with DnaB protein and other prepriming proteins DnaT, N, N', N'' a prepriming protein complex on the specific site of the template DNA recognized by protein N'
  
  
 0.822
yjjP
DUF1212 family inner membrane protein; To H.influenzae HI_0108
     
 0.757
yebB
Putative papain-like amidase yebb; To E.coli YiiX
      
 0.731
bsmA
DUF1471 domain-containing putative lipoprotein BsmA; Involved in protection of biofilms against oxidative stress
  
     0.725
yigZ
Impact family member yigz; Belongs to the IMPACT family
      
 0.605
yheO
Putative pas domain-containing dna-binding transcriptional regulator; To H.influenzae HI_0575
      
 0.604
ycaQ
annotation not available
      
 0.603
ygfB
UPF0149 family protein YgfB; Belongs to the UPF0149 family
      
 0.603
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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