| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| rplF | rplO | b3305 | b3301 | Large subunit ribosomal protein l6; This protein binds directly to at least 2 domains of the 23S ribosomal RNA, thus is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center | Large subunit ribosomal protein l15; This protein binds the 5S rRNA. It is required for the late stages of subunit assembly, and is essential for 5S rRNA assembly onto the ribosome | 0.999 |
| rplF | rplQ | b3305 | b3294 | Large subunit ribosomal protein l6; This protein binds directly to at least 2 domains of the 23S ribosomal RNA, thus is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center | Large subunit ribosomal protein l17; Requires L15 for assembly into the 50S subunit | 0.999 |
| rplF | rplU | b3305 | b3186 | Large subunit ribosomal protein l6; This protein binds directly to at least 2 domains of the 23S ribosomal RNA, thus is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center | Large subunit ribosomal protein l21; This protein binds to 23S rRNA in the presence of protein L20 | 0.999 |
| rplF | rplX | b3305 | b3309 | Large subunit ribosomal protein l6; This protein binds directly to at least 2 domains of the 23S ribosomal RNA, thus is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center | Large subunit ribosomal protein l24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. It is not thought to be involved in the functions of the mature 50S subunit in vitro | 0.999 |
| rplF | rpmA | b3305 | b3185 | Large subunit ribosomal protein l6; This protein binds directly to at least 2 domains of the 23S ribosomal RNA, thus is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center | Large subunit ribosomal protein l27; 50S ribosomal protein L27; Protein involved in structural constituent of ribosome and translation | 0.999 |
| rplF | rpmF | b3305 | b1089 | Large subunit ribosomal protein l6; This protein binds directly to at least 2 domains of the 23S ribosomal RNA, thus is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center | Large subunit ribosomal protein l32; 50S ribosomal protein L32; Protein involved in structural constituent of ribosome and translation | 0.999 |
| rplF | rpsH | b3305 | b3306 | Large subunit ribosomal protein l6; This protein binds directly to at least 2 domains of the 23S ribosomal RNA, thus is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center | Small subunit ribosomal protein s8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit | 0.999 |
| rplF | rpsK | b3305 | b3297 | Large subunit ribosomal protein l6; This protein binds directly to at least 2 domains of the 23S ribosomal RNA, thus is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center | Small subunit ribosomal protein s11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome (By similarity) | 0.999 |
| rplF | ykgM | b3305 | b0296 | Large subunit ribosomal protein l6; This protein binds directly to at least 2 domains of the 23S ribosomal RNA, thus is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center | annotation not available | 0.983 |
| rplF | ykgO | b3305 | b4506 | Large subunit ribosomal protein l6; This protein binds directly to at least 2 domains of the 23S ribosomal RNA, thus is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center | annotation not available | 0.996 |
| rplO | rplF | b3301 | b3305 | Large subunit ribosomal protein l15; This protein binds the 5S rRNA. It is required for the late stages of subunit assembly, and is essential for 5S rRNA assembly onto the ribosome | Large subunit ribosomal protein l6; This protein binds directly to at least 2 domains of the 23S ribosomal RNA, thus is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center | 0.999 |
| rplO | rplQ | b3301 | b3294 | Large subunit ribosomal protein l15; This protein binds the 5S rRNA. It is required for the late stages of subunit assembly, and is essential for 5S rRNA assembly onto the ribosome | Large subunit ribosomal protein l17; Requires L15 for assembly into the 50S subunit | 0.999 |
| rplO | rplU | b3301 | b3186 | Large subunit ribosomal protein l15; This protein binds the 5S rRNA. It is required for the late stages of subunit assembly, and is essential for 5S rRNA assembly onto the ribosome | Large subunit ribosomal protein l21; This protein binds to 23S rRNA in the presence of protein L20 | 0.999 |
| rplO | rplX | b3301 | b3309 | Large subunit ribosomal protein l15; This protein binds the 5S rRNA. It is required for the late stages of subunit assembly, and is essential for 5S rRNA assembly onto the ribosome | Large subunit ribosomal protein l24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. It is not thought to be involved in the functions of the mature 50S subunit in vitro | 0.999 |
| rplO | rpmA | b3301 | b3185 | Large subunit ribosomal protein l15; This protein binds the 5S rRNA. It is required for the late stages of subunit assembly, and is essential for 5S rRNA assembly onto the ribosome | Large subunit ribosomal protein l27; 50S ribosomal protein L27; Protein involved in structural constituent of ribosome and translation | 0.999 |
| rplO | rpmF | b3301 | b1089 | Large subunit ribosomal protein l15; This protein binds the 5S rRNA. It is required for the late stages of subunit assembly, and is essential for 5S rRNA assembly onto the ribosome | Large subunit ribosomal protein l32; 50S ribosomal protein L32; Protein involved in structural constituent of ribosome and translation | 0.999 |
| rplO | rpsH | b3301 | b3306 | Large subunit ribosomal protein l15; This protein binds the 5S rRNA. It is required for the late stages of subunit assembly, and is essential for 5S rRNA assembly onto the ribosome | Small subunit ribosomal protein s8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit | 0.999 |
| rplO | rpsK | b3301 | b3297 | Large subunit ribosomal protein l15; This protein binds the 5S rRNA. It is required for the late stages of subunit assembly, and is essential for 5S rRNA assembly onto the ribosome | Small subunit ribosomal protein s11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome (By similarity) | 0.999 |
| rplO | ykgM | b3301 | b0296 | Large subunit ribosomal protein l15; This protein binds the 5S rRNA. It is required for the late stages of subunit assembly, and is essential for 5S rRNA assembly onto the ribosome | annotation not available | 0.984 |
| rplO | ykgO | b3301 | b4506 | Large subunit ribosomal protein l15; This protein binds the 5S rRNA. It is required for the late stages of subunit assembly, and is essential for 5S rRNA assembly onto the ribosome | annotation not available | 0.997 |
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