STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
b4516annotation not available (91 aa)    
Predicted Functional Partners:
insB4
Insertion element is1 protein insb; Absolutely required for transposition of IS1
  
 0.985
b0274
annotation not available
  
 0.951
insB1
Insertion element is1 protein insb; IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related
  
 0.928
insB2
Insertion element is1 protein insb; Absolutely required for transposition of IS1
  
 0.926
b1893
IS1 transposase B; IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related
  
 0.920
b3445
annotation not available
  
 0.916
b1331
IS5 transposase and trans-activator; IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related
      
 0.790
insH5
Rac prophage; is5 transposase and trans-activator; Involved in the transposition of the insertion sequence IS5
      
 0.790
b3218
Pseudogene fragment; interrupted by IS5
      
 0.790
insH10
CP4-6 prophage; IS5 transposase and trans-activator; Involved in the transposition of the insertion sequence IS5
      
 0.786
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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