Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
azuC | yecJ | b4663 | b4537 | Acid-inducible small membrane-associated protein. | DUF2766 family protein. | 0.510 |
azuC | yecR | b4663 | b1904 | Acid-inducible small membrane-associated protein. | Lipoprotein, function unknown. | 0.442 |
sfsA | yecJ | b0146 | b4537 | Sugar fermentation stimulation protein A; Binds to DNA non-specifically. Could be a regulatory factor involved in maltose metabolism. | DUF2766 family protein. | 0.520 |
yecJ | azuC | b4537 | b4663 | DUF2766 family protein. | Acid-inducible small membrane-associated protein. | 0.510 |
yecJ | sfsA | b4537 | b0146 | DUF2766 family protein. | Sugar fermentation stimulation protein A; Binds to DNA non-specifically. Could be a regulatory factor involved in maltose metabolism. | 0.520 |
yecJ | yecR | b4537 | b1904 | DUF2766 family protein. | Lipoprotein, function unknown. | 0.664 |
yecJ | yibI | b4537 | b3598 | DUF2766 family protein. | DUF3302 family inner membrane protein; To E.coli YiaW. | 0.702 |
yecR | azuC | b1904 | b4663 | Lipoprotein, function unknown. | Acid-inducible small membrane-associated protein. | 0.442 |
yecR | yecJ | b1904 | b4537 | Lipoprotein, function unknown. | DUF2766 family protein. | 0.664 |
yecR | yibI | b1904 | b3598 | Lipoprotein, function unknown. | DUF3302 family inner membrane protein; To E.coli YiaW. | 0.456 |
yibI | yecJ | b3598 | b4537 | DUF3302 family inner membrane protein; To E.coli YiaW. | DUF2766 family protein. | 0.702 |
yibI | yecR | b3598 | b1904 | DUF3302 family inner membrane protein; To E.coli YiaW. | Lipoprotein, function unknown. | 0.456 |