Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| acrZ | ynhF | b0762 | b4602 | Acrab-tolc efflux pump accessory protein, membrane-associated; AcrA-AcrB-AcrZ-TolC is a drug efflux protein complex with a broad substrate specificity. This protein binds to AcrB and is required for efflux of some but not all substrates, suggesting it may influence the specificity of drug export | annotation not available | 0.499 |
| acrZ | yoaJ | b0762 | b4675 | Acrab-tolc efflux pump accessory protein, membrane-associated; AcrA-AcrB-AcrZ-TolC is a drug efflux protein complex with a broad substrate specificity. This protein binds to AcrB and is required for efflux of some but not all substrates, suggesting it may influence the specificity of drug export | annotation not available | 0.424 |
| acrZ | yoaK | b0762 | b4676 | Acrab-tolc efflux pump accessory protein, membrane-associated; AcrA-AcrB-AcrZ-TolC is a drug efflux protein complex with a broad substrate specificity. This protein binds to AcrB and is required for efflux of some but not all substrates, suggesting it may influence the specificity of drug export | annotation not available | 0.780 |
| acrZ | yohP | b0762 | b4679 | Acrab-tolc efflux pump accessory protein, membrane-associated; AcrA-AcrB-AcrZ-TolC is a drug efflux protein complex with a broad substrate specificity. This protein binds to AcrB and is required for efflux of some but not all substrates, suggesting it may influence the specificity of drug export | Uncharacterized membrane protein YohP; Pseudogene; putative channel/filament proteins | 0.499 |
| acrZ | ypdK | b0762 | b4680 | Acrab-tolc efflux pump accessory protein, membrane-associated; AcrA-AcrB-AcrZ-TolC is a drug efflux protein complex with a broad substrate specificity. This protein binds to AcrB and is required for efflux of some but not all substrates, suggesting it may influence the specificity of drug export | annotation not available | 0.483 |
| acrZ | yqgB | b0762 | b2939 | Acrab-tolc efflux pump accessory protein, membrane-associated; AcrA-AcrB-AcrZ-TolC is a drug efflux protein complex with a broad substrate specificity. This protein binds to AcrB and is required for efflux of some but not all substrates, suggesting it may influence the specificity of drug export | Acid stress response protein yqgb; Belongs to the YqgB family | 0.735 |
| yeaP | yoaJ | b1794 | b4675 | Diguanylate cyclase dgcp; Catalyzes the synthesis of cyclic-di-GMP (c-di-GMP) via the condensation of 2 GTP molecules. Cyclic-di-GMP is a second messenger which controls cell surface-associated traits in bacteria | annotation not available | 0.791 |
| yeaP | yoaK | b1794 | b4676 | Diguanylate cyclase dgcp; Catalyzes the synthesis of cyclic-di-GMP (c-di-GMP) via the condensation of 2 GTP molecules. Cyclic-di-GMP is a second messenger which controls cell surface-associated traits in bacteria | annotation not available | 0.820 |
| ynhF | acrZ | b4602 | b0762 | annotation not available | Acrab-tolc efflux pump accessory protein, membrane-associated; AcrA-AcrB-AcrZ-TolC is a drug efflux protein complex with a broad substrate specificity. This protein binds to AcrB and is required for efflux of some but not all substrates, suggesting it may influence the specificity of drug export | 0.499 |
| ynhF | yoaJ | b4602 | b4675 | annotation not available | annotation not available | 0.730 |
| ynhF | yoaK | b4602 | b4676 | annotation not available | annotation not available | 0.781 |
| ynhF | yohP | b4602 | b4679 | annotation not available | Uncharacterized membrane protein YohP; Pseudogene; putative channel/filament proteins | 0.735 |
| ynhF | ypdK | b4602 | b4680 | annotation not available | annotation not available | 0.732 |
| ynhF | yqeL | b4602 | b4683 | annotation not available | annotation not available | 0.815 |
| ynhF | yqfG | b4602 | b4684 | annotation not available | annotation not available | 0.737 |
| ynhF | yqgB | b4602 | b2939 | annotation not available | Acid stress response protein yqgb; Belongs to the YqgB family | 0.736 |
| ynhF | yshB | b4602 | b4686 | annotation not available | annotation not available | 0.824 |
| yoaJ | acrZ | b4675 | b0762 | annotation not available | Acrab-tolc efflux pump accessory protein, membrane-associated; AcrA-AcrB-AcrZ-TolC is a drug efflux protein complex with a broad substrate specificity. This protein binds to AcrB and is required for efflux of some but not all substrates, suggesting it may influence the specificity of drug export | 0.424 |
| yoaJ | yeaP | b4675 | b1794 | annotation not available | Diguanylate cyclase dgcp; Catalyzes the synthesis of cyclic-di-GMP (c-di-GMP) via the condensation of 2 GTP molecules. Cyclic-di-GMP is a second messenger which controls cell surface-associated traits in bacteria | 0.791 |
| yoaJ | ynhF | b4675 | b4602 | annotation not available | annotation not available | 0.730 |
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