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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yoeIannotation not available (20 aa)    
Predicted Functional Partners:
yhcC
Putative fe-s oxidoreductase, radical sam superfamily protein; In vitro, can cleave S-adenosyl-L-methionine into methionine and 5'-deoxyadenosine (AdoH)
      
 0.877
yrbN
annotation not available
      
 0.870
plaP
Putrescine importer, low affinity; Putrescine importer. Required for induction of type 1 pili- driven surface motility
       0.845
yoaI
annotation not available
      
 0.787
ynhF
annotation not available
      
 0.786
ypdK
annotation not available
      
 0.781
yjjY
annotation not available
      
 0.701
alaE
Alanine exporter, alanine-inducible, stress-responsive; Exports L-alanine
      
 0.679
yqaE
annotation not available
      
 0.678
tpr
A protamine-like protein
      
 0.608
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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